RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 MYL7Q01449 175 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 MTERF2Q49AM1 385 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 ZNF394Q53GI3 561 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 RC3H1Q5TC82 1133 aaKnown RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 GLYCTKQ8IVS8 523 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 GUF1Q8N442 669 aaKnown RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 ELMO3Q96BJ8 720 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 LRRC1Q9BTT6 524 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 TMOD4Q9NZQ9 345 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 SEPT9Q9UHD8 586 aaPredicted RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 HMGB2P26583 209 aaKnown RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 STRN3Q13033 797 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 LMBRD2Q68DH5 695 aaPredicted RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 PAXIP1Q6ZW49 1069 aaPredicted RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 CEP57Q86XR8 500 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 TMEM39BQ9GZU3 492 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 MTUS1Q9ULD2 1270 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 CAPN11Q9UMQ6 739 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 MYL1P05976 194 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 MYBP10242 640 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 PRMT6Q96LA8 375 aaPredicted RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 NUCKS1Q9H1E3 243 aaKnown RBP15.92■□□□□ 0.14
CNOT9-201ENST00000273064 LRRC4BQ9NT99 713 aa15.92■□□□□ 0.14
CNOT9-201ENST00000273064 ZNF18P17022 549 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 ZSCAN20P17040 1043 aaPredicted RBP15.91■□□□□ 0.14
CNOT9-201ENST00000273064 TMOD1P28289 359 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 NF2P35240 595 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 ANKRD42Q8N9B4 389 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 SAAL1Q96ER3 474 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 SLC16A4O15374 487 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 IL17AQ16552 155 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 SLC10A5Q5PT55 438 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 DCUN1D2Q6PH85 259 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 KCNK18Q7Z418 384 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 PNKPQ96T60 521 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 METTL14Q9HCE5 456 aaKnown RBP15.91■□□□□ 0.14
CNOT9-201ENST00000273064 RNF225M0QZC1 329 aaPredicted RBP15.91■□□□□ 0.14
CNOT9-201ENST00000273064 MARK3P27448 753 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 TTLL6Q8N841 843 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 SUPT20HQ8NEM7 779 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 COG1Q8WTW3 980 aa15.91■□□□□ 0.14
CNOT9-201ENST00000273064 EIF2AK1Q9BQI3 630 aaKnown RBP15.91■□□□□ 0.14
CNOT9-201ENST00000273064 MTRF1LQ9UGC7 380 aaKnown RBP15.91■□□□□ 0.14
CNOT9-201ENST00000273064 LIG4P49917 911 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 MKRN3Q13064 507 aaKnown RBP15.9■□□□□ 0.14
CNOT9-201ENST00000273064 GRB10Q13322 594 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 TRIM65Q6PJ69 517 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 FBXL16Q8N461 479 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 MAGOHBQ96A72 148 aaKnown RBP15.9■□□□□ 0.14
CNOT9-201ENST00000273064 NACC1Q96RE7 527 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 REEP2Q9BRK0 252 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 DNAJC12Q9UKB3 198 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 SERPING1P05155 500 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 SRGNP10124 158 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 GGCXP38435 758 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 NCAPG2Q86XI2 1143 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 GPATCH11Q8N954 259 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 MORC2Q9Y6X9 1032 aaPredicted RBP15.9■□□□□ 0.14
CNOT9-201ENST00000273064 PVALEFA0A1B0GWK0 134 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 ATF7P17544 494 aaPredicted RBP15.9■□□□□ 0.14
CNOT9-201ENST00000273064 PSMC6P62333 389 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 MDM2Q00987 491 aaPredicted RBP15.9■□□□□ 0.14
CNOT9-201ENST00000273064 UBL4BQ8N7F7 174 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 ZNF384Q8TF68 577 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 OSBPL9Q96SU4 736 aa15.9■□□□□ 0.14
CNOT9-201ENST00000273064 IPO5O00410 1097 aaKnown RBP15.89■□□□□ 0.14
CNOT9-201ENST00000273064 ZBTB39O15060 712 aa15.89■□□□□ 0.14
CNOT9-201ENST00000273064 PRPHP41219 470 aa15.89■□□□□ 0.14
CNOT9-201ENST00000273064 PPFIA1Q13136 1202 aa15.89■□□□□ 0.14
CNOT9-201ENST00000273064 ZNF365Q70YC5 407 aa15.89■□□□□ 0.14
CNOT9-201ENST00000273064 KCNB1Q14721 858 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 KNOP1Q1ED39 458 aaKnown RBP15.89■□□□□ 0.13
CNOT9-201ENST00000273064 CYFIP1Q7L576 1253 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 DEPTORQ8TB45 409 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 RPGRIP1Q96KN7 1286 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 RMDN3Q96TC7 470 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 SEMA6BQ9H3T3 888 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 SARSP49591 514 aaKnown RBP15.89■□□□□ 0.13
CNOT9-201ENST00000273064 PDCLQ13371 301 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 TRPC3Q13507 836 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 ARHGAP27Q6ZUM4 889 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 CNTNAP4Q9C0A0 1308 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 FGGP02679 453 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 RXRBP28702 533 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 PPP4CP60510 307 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 COL23A1Q86Y22 540 aaPredicted RBP15.89■□□□□ 0.13
CNOT9-201ENST00000273064 CAPS2Q9BXY5 557 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 RASSF4Q9H2L5 321 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 PRR12Q9ULL5 1215 aa15.89■□□□□ 0.13
CNOT9-201ENST00000273064 KIF4AO95239 1232 aa15.88■□□□□ 0.13
CNOT9-201ENST00000273064 CD58P19256 250 aa15.88■□□□□ 0.13
CNOT9-201ENST00000273064 EZH2Q15910 746 aaKnown RBP15.88■□□□□ 0.13
CNOT9-201ENST00000273064 TTI2Q6NXR4 508 aa15.88■□□□□ 0.13
CNOT9-201ENST00000273064 SH2D3CQ8N5H7 860 aa15.88■□□□□ 0.13
CNOT9-201ENST00000273064 CAPN6Q9Y6Q1 641 aa15.88■□□□□ 0.13
CNOT9-201ENST00000273064 LTN1O94822 1766 aa15.88■□□□□ 0.13
CNOT9-201ENST00000273064 ADRA2BP18089 450 aa15.88■□□□□ 0.13
CNOT9-201ENST00000273064 ACTN2P35609 894 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms