RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
SF3B4-201ENST00000271628 RAD51AP2Q09MP3 1159 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 TBC1D8BQ0IIM8 1120 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 FKBP15Q5T1M5 1219 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 RINT1Q6NUQ1 792 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 SLC30A10Q6XR72 485 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 SYT10Q6XYQ8 523 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 WNK4Q96J92 1243 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
SF3B4-201ENST00000271628 PDCD2LQ9BRP1 358 aa16.95■□□□□ 0.3
SF3B4-201ENST00000271628 AGO4Q9HCK5 861 aaKnown RBP16.95■□□□□ 0.3
SF3B4-201ENST00000271628 COL11A1P12107 1806 aaPredicted RBP16.94■□□□□ 0.3
SF3B4-201ENST00000271628 GOLGA6L9A6NEM1 432 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 B4DLN1 442 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 MAFGO15525 162 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 TBCAO75347 108 aaKnown RBP16.94■□□□□ 0.3
SF3B4-201ENST00000271628 GNA14O95837 355 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 GAP43P17677 238 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 FXR1P51114 621 aaKnown RBP eCLIP16.94■□□□□ 0.3
SF3B4-201ENST00000271628 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
SF3B4-201ENST00000271628 BAATQ14032 418 aaPredicted RBP16.94■□□□□ 0.3
SF3B4-201ENST00000271628 ZCWPW2Q504Y3 356 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 USP50Q70EL3 339 aaPredicted RBP16.94■□□□□ 0.3
SF3B4-201ENST00000271628 GLIS3Q8NEA6 775 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 IL31RAQ8NI17 732 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 ZC3H15Q8WU90 426 aaKnown RBP16.94■□□□□ 0.3
SF3B4-201ENST00000271628 IQCDQ96DY2 449 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 EEF2KMTQ96G04 330 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 CEP63Q96MT8 703 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 TBC1D7Q9P0N9 293 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 PHLPP2Q6ZVD8 1323 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 LOXHD1Q8IVV2 1947 aa16.94■□□□□ 0.3
SF3B4-201ENST00000271628 P4HBP07237 508 aaKnown RBP16.93■□□□□ 0.3
SF3B4-201ENST00000271628 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
SF3B4-201ENST00000271628 NF2P35240 595 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 TMEM132BQ14DG7 1078 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 MIER3Q7Z3K6 550 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 PIGOQ8TEQ8 1089 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 SCFD1Q8WVM8 642 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 TRAF5O00463 557 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 DHX15O43143 795 aaKnown RBP16.93■□□□□ 0.3
SF3B4-201ENST00000271628 FECHP22830 423 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 MAN2A1Q16706 1144 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 EDRF1Q3B7T1 1238 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 VWA3BQ502W6 1294 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 LRRC55Q6ZSA7 311 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
SF3B4-201ENST00000271628 ACAD9Q9H845 621 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 OLFML3Q9NRN5 406 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 ABHD10Q9NUJ1 306 aa16.93■□□□□ 0.3
SF3B4-201ENST00000271628 MYCLP12524 364 aaPredicted RBP16.92■□□□□ 0.3
SF3B4-201ENST00000271628 MIIPQ5JXC2 388 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 C1orf186Q6ZWK4 172 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 TMTC1Q8IUR5 882 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 NSUN6Q8TEA1 469 aaKnown RBP16.92■□□□□ 0.3
SF3B4-201ENST00000271628 ERGIC2Q96RQ1 377 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 LXNQ9BS40 222 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 KCTD10Q9H3F6 313 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 ZSWIM4Q9H7M6 989 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 SEL1LQ9UBV2 794 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 PRDM4Q9UKN5 801 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 CAPN11Q9UMQ6 739 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
SF3B4-201ENST00000271628 SPDYE16A6NNV3 312 aaPredicted RBP16.92■□□□□ 0.3
SF3B4-201ENST00000271628 ADM5C9JUS6 153 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 CCND2P30279 289 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 KRT9P35527 623 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 PPATQ06203 517 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 TSR1Q2NL82 804 aaKnown RBP16.92■□□□□ 0.3
SF3B4-201ENST00000271628 FIGNQ5HY92 759 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 VSIG10LQ86VR7 867 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 RUSC1Q9BVN2 902 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 NDST4Q9H3R1 872 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 TCEAL9Q9UHQ7 104 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 ODF2LQ9ULJ1 636 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 PPP2R2CQ9Y2T4 447 aa16.92■□□□□ 0.3
SF3B4-201ENST00000271628 ITGB3BPQ13352 177 aaPredicted RBP16.91■□□□□ 0.3
SF3B4-201ENST00000271628 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
SF3B4-201ENST00000271628 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
SF3B4-201ENST00000271628 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 SFR1Q86XK3 245 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 ANKRD13AQ8IZ07 590 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 OR8K1Q8NGG5 319 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 GPRASP2Q96D09 838 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 FGFBP2Q9BYJ0 223 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 MRPL44Q9H9J2 332 aaKnown RBP16.91■□□□□ 0.3
SF3B4-201ENST00000271628 TRAF3IP3Q9Y228 551 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 SAMM50Q9Y512 469 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 WDR90Q96KV7 1748 aa16.91■□□□□ 0.3
SF3B4-201ENST00000271628 DDX39AO00148 427 aaKnown RBP16.9■□□□□ 0.3
SF3B4-201ENST00000271628 STAM2O75886 525 aa16.9■□□□□ 0.3
SF3B4-201ENST00000271628 FAM13AO94988 1023 aa16.9■□□□□ 0.3
SF3B4-201ENST00000271628 NR3C2P08235 984 aa16.9■□□□□ 0.3
SF3B4-201ENST00000271628 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
SF3B4-201ENST00000271628 SFNP31947 248 aa16.9■□□□□ 0.3
SF3B4-201ENST00000271628 MARSP56192 900 aaKnown RBP16.9■□□□□ 0.3
SF3B4-201ENST00000271628 ELF2Q15723 593 aa16.9■□□□□ 0.3
SF3B4-201ENST00000271628 BMT2Q1RMZ1 405 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms