RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 GRIN2DO15399 1336 aa27.67■■■□□ 2.02
SSBP4-201ENST00000270061 KPNA6O60684 536 aa27.66■■■□□ 2.02
SSBP4-201ENST00000270061 ARHGAP1Q07960 439 aa27.66■■■□□ 2.02
SSBP4-201ENST00000270061 MCTP2Q6DN12 878 aa27.66■■■□□ 2.02
SSBP4-201ENST00000270061 KRBA2Q6ZNG9 492 aa27.66■■■□□ 2.02
SSBP4-201ENST00000270061 ITGB8P26012 769 aa27.65■■■□□ 2.02
SSBP4-201ENST00000270061 LONP1P36776 959 aaKnown RBP27.65■■■□□ 2.02
SSBP4-201ENST00000270061 AFG1LQ8WV93 481 aa27.65■■■□□ 2.02
SSBP4-201ENST00000270061 TBX21Q9UL17 535 aa27.65■■■□□ 2.02
SSBP4-201ENST00000270061 SLC34A2O95436 690 aa27.65■■■□□ 2.02
SSBP4-201ENST00000270061 LONRF3Q496Y0 759 aa27.65■■■□□ 2.02
SSBP4-201ENST00000270061 ZFP91Q96JP5 570 aaPredicted RBP27.65■■■□□ 2.02
SSBP4-201ENST00000270061 VWA3AA6NCI4 1184 aa27.64■■■□□ 2.02
SSBP4-201ENST00000270061 STAM2O75886 525 aa27.64■■■□□ 2.02
SSBP4-201ENST00000270061 IL17AQ16552 155 aa27.64■■■□□ 2.02
SSBP4-201ENST00000270061 LETM2Q2VYF4 491 aa27.64■■■□□ 2.02
SSBP4-201ENST00000270061 CD4P01730 458 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 MMP3P08254 477 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 TGFB3P10600 412 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 USP49Q70CQ1 688 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 CNNM3Q8NE01 707 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 FAM200AQ8TCP9 573 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 ANP32BQ92688 251 aaKnown RBP27.63■■■□□ 2.01
SSBP4-201ENST00000270061 SYMPKQ92797 1274 aaKnown RBP27.63■■■□□ 2.01
SSBP4-201ENST00000270061 EMID1Q96A84 441 aaPredicted RBP27.63■■■□□ 2.01
SSBP4-201ENST00000270061 DOCK5Q9H7D0 1870 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 POLR2DO15514 142 aaKnown RBP27.63■■■□□ 2.01
SSBP4-201ENST00000270061 CCNT1O60563 726 aaKnown RBP27.63■■■□□ 2.01
SSBP4-201ENST00000270061 MRPS9P82933 396 aaKnown RBP27.63■■■□□ 2.01
SSBP4-201ENST00000270061 LAMC2Q13753 1193 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 STX1AQ16623 288 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 GNPTABQ3T906 1256 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 KANK3Q6NY19 840 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 DTHD1Q6ZMT9 781 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 DHX37Q8IY37 1157 aaKnown RBP27.63■■■□□ 2.01
SSBP4-201ENST00000270061 TMEM60Q9H2L4 133 aa27.63■■■□□ 2.01
SSBP4-201ENST00000270061 TIMP1P01033 207 aa27.62■■■□□ 2.01
SSBP4-201ENST00000270061 UBE2SQ16763 222 aa27.62■■■□□ 2.01
SSBP4-201ENST00000270061 ANO6Q4KMQ2 910 aa27.62■■■□□ 2.01
SSBP4-201ENST00000270061 EPSTI1Q96J88 318 aa27.62■■■□□ 2.01
SSBP4-201ENST00000270061 PYM1Q9BRP8 204 aaKnown RBP27.62■■■□□ 2.01
SSBP4-201ENST00000270061 USP25Q9UHP3 1055 aa27.62■■■□□ 2.01
SSBP4-201ENST00000270061 HOOK1Q9UJC3 728 aaKnown RBP27.62■■■□□ 2.01
SSBP4-201ENST00000270061 EDIL3O43854 480 aa27.61■■■□□ 2.01
SSBP4-201ENST00000270061 AP3B2Q13367 1082 aa27.61■■■□□ 2.01
SSBP4-201ENST00000270061 PCNX4Q63HM2 1172 aa27.61■■■□□ 2.01
SSBP4-201ENST00000270061 ANO10Q9NW15 660 aa27.61■■■□□ 2.01
SSBP4-201ENST00000270061 TUBE1Q9UJT0 475 aa27.61■■■□□ 2.01
SSBP4-201ENST00000270061 SPDYE3A6NKU9 549 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 NEMFO60524 1076 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 DGKDQ16760 1214 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 PPP4R3AQ6IN85 833 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 XRRA1Q6P2D8 792 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 INPP4AQ96PE3 977 aaPredicted RBP27.6■■■□□ 2.01
SSBP4-201ENST00000270061 NAP1L4Q99733 375 aaKnown RBP27.6■■■□□ 2.01
SSBP4-201ENST00000270061 B4GALT4O60513 344 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 OR52Z1P0C646 297 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 NBPF20Q3BBV1 942 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 LRIT3Q3SXY7 679 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 PPTC7Q8NI37 304 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 TRPV6Q9H1D0 765 aa27.6■■■□□ 2.01
SSBP4-201ENST00000270061 ACTN4O43707 911 aaKnown RBP27.59■■■□□ 2.01
SSBP4-201ENST00000270061 GGPS1O95749 300 aa27.59■■■□□ 2.01
SSBP4-201ENST00000270061 UBA1P22314 1058 aaKnown RBP27.59■■■□□ 2.01
SSBP4-201ENST00000270061 SP2Q02086 613 aa27.59■■■□□ 2.01
SSBP4-201ENST00000270061 FPGSQ05932 587 aa27.59■■■□□ 2.01
SSBP4-201ENST00000270061 CELF3Q5SZQ8 465 aaKnown RBP27.59■■■□□ 2.01
SSBP4-201ENST00000270061 SERTAD1Q9UHV2 236 aa27.59■■■□□ 2.01
SSBP4-201ENST00000270061 FAM47CQ5HY64 1035 aa27.58■■■□□ 2.01
SSBP4-201ENST00000270061 NFRKBQ6P4R8 1299 aa27.58■■■□□ 2.01
SSBP4-201ENST00000270061 CCDC34Q96HJ3 373 aa27.58■■■□□ 2.01
SSBP4-201ENST00000270061 PPP1R12CQ9BZL4 782 aa27.58■■■□□ 2.01
SSBP4-201ENST00000270061 SOX1O00570 391 aaPredicted RBP27.58■■■□□ 2
SSBP4-201ENST00000270061 FOSP01100 380 aaPredicted RBP27.58■■■□□ 2
SSBP4-201ENST00000270061 GCFC2P16383 781 aaKnown RBP27.58■■■□□ 2
SSBP4-201ENST00000270061 ICAM3P32942 547 aa27.58■■■□□ 2
SSBP4-201ENST00000270061 CCDC173Q0VFZ6 552 aa27.58■■■□□ 2
SSBP4-201ENST00000270061 MFSD5Q6N075 450 aa27.58■■■□□ 2
SSBP4-201ENST00000270061 AK8Q96MA6 479 aa27.58■■■□□ 2
SSBP4-201ENST00000270061 SPATA33Q96N06 139 aa27.58■■■□□ 2
SSBP4-201ENST00000270061 PPP1R9BQ96SB3 815 aa27.58■■■□□ 2
SSBP4-201ENST00000270061 MLXIPQ9HAP2 919 aa27.58■■■□□ 2
SSBP4-201ENST00000270061 SORBS3O60504 671 aa27.57■■■□□ 2
SSBP4-201ENST00000270061 SLFN14P0C7P3 912 aa27.57■■■□□ 2
SSBP4-201ENST00000270061 USP11P51784 963 aa27.57■■■□□ 2
SSBP4-201ENST00000270061 CHMP4BP1P59074 171 aa27.57■■■□□ 2
SSBP4-201ENST00000270061 MTMR9Q96QG7 549 aa27.57■■■□□ 2
SSBP4-201ENST00000270061 A0A087X0B3 334 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 SPATA31C2B4DYI2 1134 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 SUPT20HL2P0C7V6 817 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 ZNF165P49910 485 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 HSDL1Q3SXM5 330 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 PDILTQ8N807 584 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 ERCC4Q92889 916 aaPredicted RBP27.56■■■□□ 2
SSBP4-201ENST00000270061 DNAJC25Q9H1X3 360 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 HIPK3Q9H422 1215 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 EHMT1Q9H9B1 1298 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 CBX8Q9HC52 389 aa27.56■■■□□ 2
SSBP4-201ENST00000270061 TRMT13Q9NUP7 481 aaKnown RBP27.56■■■□□ 2
SSBP4-201ENST00000270061 SHHQ15465 462 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms