RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 TXNRD2Q9NNW7 524 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 CYP39A1Q9NYL5 469 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 PFASO15067 1338 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 FRMD3A2A2Y4 597 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 EML1O00423 815 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 CCND2P30279 289 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 VSIG10LQ86VR7 867 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 AGO4Q9HCK5 861 aaKnown RBP17.1■□□□□ 0.33
COPS3-201ENST00000268717 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.1■□□□□ 0.33
COPS3-201ENST00000268717 RBPJLQ9UBG7 517 aa17.1■□□□□ 0.33
COPS3-201ENST00000268717 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
COPS3-201ENST00000268717 E9PMD0 336 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 TNPO2O14787 897 aaKnown RBP17.09■□□□□ 0.33
COPS3-201ENST00000268717 EYA4O95677 639 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 CYP11B2P19099 503 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 EIF2AK2P19525 551 aaKnown RBP17.09■□□□□ 0.33
COPS3-201ENST00000268717 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
COPS3-201ENST00000268717 CCNE1P24864 410 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 PRKCZQ05513 592 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 STK4Q13043 487 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 MTMR1Q13613 665 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 TPD52L1Q16890 204 aaPredicted RBP17.09■□□□□ 0.33
COPS3-201ENST00000268717 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 CCDC65Q8IXS2 484 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 GUF1Q8N442 669 aaKnown RBP17.09■□□□□ 0.33
COPS3-201ENST00000268717 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 UNC45AQ9H3U1 944 aa17.09■□□□□ 0.33
COPS3-201ENST00000268717 A1CFQ9NQ94 594 aaKnown RBP17.09■□□□□ 0.33
COPS3-201ENST00000268717 SAMSN1Q9NSI8 373 aaKnown RBP17.09■□□□□ 0.33
COPS3-201ENST00000268717 A0A1B0GTH6 734 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 DHX15O43143 795 aaKnown RBP17.08■□□□□ 0.32
COPS3-201ENST00000268717 PEX10O60683 326 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 SLITRK3O94933 977 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 SOX10P56693 466 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 STX17P56962 302 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 GPBP1Q86WP2 473 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 GPRC5AQ8NFJ5 357 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 RAET1EQ8TD07 263 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 CDHR1Q96JP9 859 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 INPP4AQ96PE3 977 aaPredicted RBP17.08■□□□□ 0.32
COPS3-201ENST00000268717 IWS1Q96ST2 819 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 THAP9Q9H5L6 903 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 KCND2Q9NZV8 630 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 GABRQQ9UN88 632 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 PLXNB2O15031 1838 aa17.08■□□□□ 0.32
COPS3-201ENST00000268717 ZNF500O60304 480 aaPredicted RBP17.07■□□□□ 0.32
COPS3-201ENST00000268717 SLC25A27O95847 323 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 NR3C2P08235 984 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 ERVK-9P63128 1117 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 ERVK-24P63145 666 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 Q3C1V9 767 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 DYMQ7RTS9 669 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 APTXQ7Z2E3 356 aaKnown RBP17.07■□□□□ 0.32
COPS3-201ENST00000268717 NLRX1Q86UT6 975 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 VSTM4Q8IW00 320 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 ANKRD20A12PQ8NF67 263 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 RDM1Q8NG50 284 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 P2RX5Q93086 422 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 ZNF333Q96JL9 665 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
COPS3-201ENST00000268717 PAGR1Q9BTK6 254 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 SPATC1LQ9H0A9 340 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 LIMA1Q9UHB6 759 aaKnown RBP17.07■□□□□ 0.32
COPS3-201ENST00000268717 CNMDO75829 334 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 KIF20AO95235 890 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 RGS19P49795 217 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 COASYQ13057 564 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 PLS1Q14651 629 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 CENPPQ6IPU0 288 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 NACC1Q96RE7 527 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 PANK4Q9NVE7 773 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 BTBD7Q9P203 1132 aa17.07■□□□□ 0.32
COPS3-201ENST00000268717 LYPLA2O95372 231 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 FCER1AP12319 257 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 IDEP14735 1019 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 PTGS1P23219 599 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 EEF1GP26641 437 aaKnown RBP17.06■□□□□ 0.32
COPS3-201ENST00000268717 CLCN1P35523 988 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 FLT3LGP49771 235 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 KRT76Q01546 638 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
COPS3-201ENST00000268717 CCDC144BQ3MJ40 725 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 FAM26FQ5R3K3 315 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 CCDC150Q8NCX0 1101 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 SH3TC2Q8TF17 1288 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 DYDC2Q96IM9 177 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 KCNF1Q9H3M0 494 aa17.06■□□□□ 0.32
COPS3-201ENST00000268717 SSBP05455 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
COPS3-201ENST00000268717 P4HBP07237 508 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms