RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 CEP63Q96MT8 703 aa24.31■■□□□ 1.48
CDR2-201ENST00000268383 NHSQ6T4R5 1651 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 NFIAQ12857 509 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 QRICH1Q2TAL8 776 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 RBM46Q8TBY0 533 aaKnown RBP24.3■■□□□ 1.48
CDR2-201ENST00000268383 USP40Q9NVE5 1235 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 MYBP10242 640 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 HOXD13P35453 343 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 CYP4A11Q02928 519 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 PRR16Q569H4 304 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 TCERG1LQ5VWI1 586 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 SYN2Q92777 582 aaPredicted RBP24.3■■□□□ 1.48
CDR2-201ENST00000268383 SPAG5Q96R06 1193 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 PCDHA1Q9Y5I3 950 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 PCDHAC2Q9Y5I4 1007 aa24.3■■□□□ 1.48
CDR2-201ENST00000268383 TNFRSF8P28908 595 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 CASP4P49662 377 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 PAK2Q13177 524 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 HLTFQ14527 1009 aaKnown RBP eCLIP24.29■■□□□ 1.481e-6■■□□□ 14.1
CDR2-201ENST00000268383 IRF2BP2Q7Z5L9 587 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 SFR1Q86XK3 245 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 CATSPER3Q86XQ3 398 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 USP38Q8NB14 1042 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 NT5C3AQ9H0P0 336 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 AIPL1Q9NZN9 384 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 TSKSQ9UJT2 592 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 ATF5Q9Y2D1 282 aaPredicted RBP24.29■■□□□ 1.48
CDR2-201ENST00000268383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.29■■□□□ 1.48
CDR2-201ENST00000268383 SFI1A8K8P3 1242 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 CETN3O15182 167 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 CLIC2O15247 247 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 CEP104O60308 925 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 EPB41P11171 864 aaKnown RBP24.29■■□□□ 1.48
CDR2-201ENST00000268383 SLC12A3P55017 1021 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 GLE1Q53GS7 698 aaKnown RBP24.29■■□□□ 1.48
CDR2-201ENST00000268383 TADA2BQ86TJ2 420 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 SRCAPQ6ZRS2 3230 aa24.29■■□□□ 1.48
CDR2-201ENST00000268383 ERVK-9P63128 1117 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 DOK7Q18PE1 504 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 MAATS1Q7Z4T9 603 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 PPM1EQ8WY54 764 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 RUBCNQ92622 972 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 NUCKS1Q9H1E3 243 aaKnown RBP24.28■■□□□ 1.48
CDR2-201ENST00000268383 DHX36Q9H2U1 1008 aaKnown RBP24.28■■□□□ 1.48
CDR2-201ENST00000268383 LRRC4BQ9NT99 713 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 SHTN1A0MZ66 631 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 NDUFAB1O14561 156 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 UCHL3P15374 230 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 CDC37Q16543 378 aaPredicted RBP24.28■■□□□ 1.48
CDR2-201ENST00000268383 DPY19L2P1Q6NXN4 242 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 CERS3Q8IU89 383 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 ANO3Q9BYT9 981 aa24.28■■□□□ 1.48
CDR2-201ENST00000268383 POLD1P28340 1107 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 SEC24CP53992 1094 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 TCP10Q12799 353 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 RPS6KA1Q15418 735 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 HYIQ5T013 277 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 SLF2Q8IX21 1173 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 KAT2BQ92831 832 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 REEP2Q9BRK0 252 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 KDM3AQ9Y4C1 1321 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 PLIN4Q96Q06 1357 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 SERPINB2P05120 415 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 USH1GQ495M9 461 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 EFCAB13Q8IY85 973 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 DDX47Q9H0S4 455 aaKnown RBP24.27■■□□□ 1.48
CDR2-201ENST00000268383 LUC7LQ9NQ29 371 aaKnown RBP24.27■■□□□ 1.48
CDR2-201ENST00000268383 PLAAQ9Y263 795 aa24.27■■□□□ 1.48
CDR2-201ENST00000268383 AKAP3O75969 853 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 HPDP32754 393 aaPredicted RBP24.26■■□□□ 1.47
CDR2-201ENST00000268383 SEPT2Q15019 361 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 GBP6Q6ZN66 633 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 TAF4BQ92750 862 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 FAM107BQ9H098 131 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 NEUROG2Q9H2A3 272 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 KCNMB3Q9NPA1 279 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 ZNF831Q5JPB2 1677 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 PON1P27169 355 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 MARSP56192 900 aaKnown RBP24.26■■□□□ 1.47
CDR2-201ENST00000268383 GIT2Q14161 759 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 CEP85LQ5SZL2 805 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 CYP2W1Q8TAV3 490 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 ARMCX3Q9UH62 379 aaPredicted RBP24.26■■□□□ 1.47
CDR2-201ENST00000268383 TMCO5BA8MYB1 307 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 KIF4AO95239 1232 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 GNA14O95837 355 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 ITGA4P13612 1032 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 SKOR1P84550 965 aa24.26■■□□□ 1.47
CDR2-201ENST00000268383 ADAMTSL1Q8N6G6 1762 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 SMCHD1A6NHR9 2005 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 FLT3P36888 993 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 PPP1R18Q6NYC8 613 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 ALKBH5Q6P6C2 394 aaKnown RBP24.25■■□□□ 1.47
CDR2-201ENST00000268383 TBC1D22AQ8WUA7 517 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 RNF14Q9UBS8 474 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 NAGPAQ9UK23 515 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 EXOC3L4Q17RC7 722 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 CRY2Q49AN0 593 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 FBXW10Q5XX13 1052 aa24.25■■□□□ 1.47
CDR2-201ENST00000268383 RBM17Q96I25 401 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms