RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 LGALS2P05162 132 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 P4HBP07237 508 aaKnown RBP16.05■□□□□ 0.16
SSBP1-201ENST00000265304 ASGR1P07306 291 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 PSAPP07602 524 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 SPATA31C1P0DKV0 1188 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 XRCC6P12956 609 aaKnown RBP eCLIP16.05■□□□□ 0.16
SSBP1-201ENST00000265304 RPA1P27694 616 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 HOXC8P31273 242 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 TECP42680 631 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 ACLYP53396 1101 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 BEX3Q00994 111 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 STK38Q15208 465 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 TMEM266Q2M3C6 531 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 C1orf53Q5VUE5 145 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 MIER3Q7Z3K6 550 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 CCDC60Q8IWA6 550 aaPredicted RBP16.05■□□□□ 0.16
SSBP1-201ENST00000265304 KRI1Q8N9T8 703 aaKnown RBP16.05■□□□□ 0.16
SSBP1-201ENST00000265304 MMTAG2Q9BU76 263 aaKnown RBP16.05■□□□□ 0.16
SSBP1-201ENST00000265304 CCSER1Q9C0I3 900 aa16.05■□□□□ 0.16
SSBP1-201ENST00000265304 FAM237AA0A1B0GTK4 181 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 ATP4AP20648 1035 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 GRIN1Q05586 938 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 SESTD1Q86VW0 696 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 C4orf19Q8IY42 314 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 TMEM87AQ8NBN3 555 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 CHAMP1Q96JM3 812 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 EIF2AK1Q9BQI3 630 aaKnown RBP16.04■□□□□ 0.16
SSBP1-201ENST00000265304 MTG1Q9BT17 334 aaPredicted RBP16.04■□□□□ 0.16
SSBP1-201ENST00000265304 TUFT1Q9NNX1 390 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 LRWD1Q9UFC0 647 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 TCEAL9Q9UHQ7 104 aa16.04■□□□□ 0.16
SSBP1-201ENST00000265304 GRIN2DO15399 1336 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 VWA3AA6NCI4 1184 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 POTEMA6NI47 508 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 H3BRB1 525 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 DDX39AO00148 427 aaKnown RBP16.03■□□□□ 0.16
SSBP1-201ENST00000265304 ZNF862O60290 1169 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 CUTAO60888 179 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 TFRCP02786 760 aaKnown RBP16.03■□□□□ 0.16
SSBP1-201ENST00000265304 MARCKSP29966 332 aaPredicted RBP16.03■□□□□ 0.16
SSBP1-201ENST00000265304 QARSP47897 775 aaKnown RBP16.03■□□□□ 0.16
SSBP1-201ENST00000265304 CDK7P50613 346 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 STAT5BP51692 787 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 PSMC5P62195 406 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
SSBP1-201ENST00000265304 SNX17Q15036 470 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 ADALQ6DHV7 355 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 SWSAP1Q6NVH7 229 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 CATSPER3Q86XQ3 398 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 TUT1Q9H6E5 874 aaKnown RBP16.03■□□□□ 0.16
SSBP1-201ENST00000265304 ERAP1Q9NZ08 941 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 PCDHA7Q9UN72 937 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 ARID2Q68CP9 1835 aa16.03■□□□□ 0.16
SSBP1-201ENST00000265304 KBTBD13C9JR72 458 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.16
SSBP1-201ENST00000265304 ADAM17P78536 824 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 PTPN11Q06124 597 aaPredicted RBP16.02■□□□□ 0.16
SSBP1-201ENST00000265304 FAM160B1Q5W0V3 765 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 CXCL17Q6UXB2 119 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 ATP6V0A1Q93050 837 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 SPATA32Q96LK8 384 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 KATNAL1Q9BW62 490 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 NIFKQ9BYG3 293 aaKnown RBP16.02■□□□□ 0.16
SSBP1-201ENST00000265304 CSRNP2Q9H175 543 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 ZSWIM4Q9H7M6 989 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 ZNF302Q9NR11 478 aa16.02■□□□□ 0.16
SSBP1-201ENST00000265304 A0A1W2PQ27 194 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 A0A1W2PQ64 194 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 A0A1W2PQD8 194 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 MYCP01106 439 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-201ENST00000265304 TARBP2Q15633 366 aaKnown RBP16.01■□□□□ 0.15
SSBP1-201ENST00000265304 FOXD4L6Q3SYB3 417 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-201ENST00000265304 NCAPH2Q6IBW4 605 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 NFRKBQ6P4R8 1299 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 FOXD4L3Q6VB84 417 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-201ENST00000265304 ATP8B4Q8TF62 1192 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 CEP89Q96ST8 783 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 RNPEPQ9H4A4 650 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 AZI2Q9H6S1 392 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 RGL1Q9NZL6 768 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 WRAP73Q9P2S5 460 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-201ENST00000265304 GABBR1Q9UBS5 961 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 ZNF215Q9UL58 517 aaPredicted RBP16.01■□□□□ 0.15
SSBP1-201ENST00000265304 PPME1Q9Y570 386 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 CEP290O15078 2479 aa16.01■□□□□ 0.15
SSBP1-201ENST00000265304 ALPK3Q96L96 1907 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 A0A1W2PQ45 241 aaPredicted RBP16■□□□□ 0.15
SSBP1-201ENST00000265304 A0A1W2PQY0 241 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 ZBTB42B2RXF5 422 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 CHMP2AO43633 222 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 SORBS3O60504 671 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 MED24O75448 989 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 CMA1P23946 247 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 PSEN2P49810 448 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 SP4Q02446 784 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 PLCB4Q15147 1175 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 ECM1Q16610 540 aa16■□□□□ 0.15
SSBP1-201ENST00000265304 UGCGQ16739 394 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms