RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 JPH2Q9BR39 696 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 NEUROG2Q9H2A3 272 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 ARMCX3Q9UH62 379 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 SCN7AQ01118 1682 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 KIAA1551Q9HCM1 1747 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 TTI1O43156 1089 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 SART1O43290 800 aaKnown RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 KIF4AO95239 1232 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 EXOC3L4Q17RC7 722 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 MYCBPAPQ8TBZ2 947 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 TRIM51Q9BSJ1 452 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 CCDC113Q9H0I3 377 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 CD209Q9NNX6 404 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 XIRP1Q702N8 1843 aaKnown RBP13.56□□□□□ -0.24
CHMP3-201ENST00000263856 SPATA31A1Q5TZJ5 1347 aa13.56□□□□□ -0.24
CHMP3-201ENST00000263856 ROBO1Q9Y6N7 1651 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 GUCY2CP25092 1073 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 RFC4P35249 363 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 PSMC6P62333 389 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 GPSM2P81274 684 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 SKOR1P84550 965 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 PSMD2Q13200 908 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 KDM7AQ6ZMT4 941 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 CCDC114Q96M63 670 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 MXD3Q9BW11 206 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 JMJD4Q9H9V9 463 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 CD248Q9HCU0 757 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 ATP8A1Q9Y2Q0 1164 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 SNED1Q8TER0 1413 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 TMEM110-MUSTN1A8MSY1 372 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 RSPH10B2B2RC85 870 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 EDIL3O43854 480 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 PPP1R11O60927 126 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 GCNT3O95395 438 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 RSPH10BP0C881 870 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 XRCC5P13010 732 aaKnown RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 ZNF211Q13398 564 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 PLS1Q14651 629 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 ZNF572Q7Z3I7 529 aaPredicted RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 TRIM59Q8IWR1 403 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 PROM2Q8N271 834 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 WHAMMQ8TF30 809 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 NUCKS1Q9H1E3 243 aaKnown RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 LOC102724159A0A0B4J2E5 919 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 MED24O75448 989 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 MYBP10242 640 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 EPB41P11171 864 aaKnown RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 CASP4P49662 377 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 MRPL12P52815 198 aaKnown RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 SEMA3FQ13275 785 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 PWP2Q15269 919 aaKnown RBP13.55□□□□□ -0.24
CHMP3-201ENST00000263856 CCDC121Q6ZUS5 278 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 CNBD1Q8NA66 436 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 RDH13Q8NBN7 331 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 SELENOSQ9BQE4 189 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 MTMR4Q9NYA4 1195 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
CHMP3-201ENST00000263856 PGRMC1O00264 195 aaKnown RBP13.54□□□□□ -0.24
CHMP3-201ENST00000263856 CHMP2AO43633 222 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 UCHL3P15374 230 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
CHMP3-201ENST00000263856 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 RNF14Q9UBS8 474 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 DCDC2CA8MYV0 355 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 KRT13P13646 458 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 CYP11B2P19099 503 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 USP8P40818 1118 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 MAGOHP61326 146 aaKnown RBP13.54□□□□□ -0.24
CHMP3-201ENST00000263856 ACTN3Q08043 901 aaPredicted RBP13.54□□□□□ -0.24
CHMP3-201ENST00000263856 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
CHMP3-201ENST00000263856 KCNA1Q09470 495 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 TCP10Q12799 353 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 PDIA5Q14554 519 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 TMEM119Q4V9L6 283 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 CEP57Q86XR8 500 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 MAGOHBQ96A72 148 aaKnown RBP13.54□□□□□ -0.24
CHMP3-201ENST00000263856 CABS1Q96KC9 395 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 RIOX1Q9H6W3 641 aa13.54□□□□□ -0.24
CHMP3-201ENST00000263856 CCNL1Q9UK58 526 aaPredicted RBP13.54□□□□□ -0.24
CHMP3-201ENST00000263856 RDXP35241 583 aaKnown RBP13.53□□□□□ -0.24
CHMP3-201ENST00000263856 CDR1P51861 262 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 CACNB3P54284 484 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 ARHGAP44Q17R89 818 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 SHROOM1Q2M3G4 852 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-201ENST00000263856 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 SLC10A5Q5PT55 438 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 CPLX4Q7Z7G2 160 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 MDM1Q8TC05 714 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 SCLT1Q96NL6 688 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 NT5C3AQ9H0P0 336 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 OSGEPQ9NPF4 335 aa13.53□□□□□ -0.24
CHMP3-201ENST00000263856 CHORDC1Q9UHD1 332 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms