RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CCND3P30281 292 aaPredicted RBP30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 SPATA33Q96N06 139 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 SERTAD1Q9UHV2 236 aa30.81■■■□□ 2.52
SMARCD3-201ENST00000262188 SLITRK3O94933 977 aa30.8■■■□□ 2.52
SMARCD3-201ENST00000262188 MSNP26038 577 aaKnown RBP30.8■■■□□ 2.52
SMARCD3-201ENST00000262188 TXLNAP40222 546 aa30.8■■■□□ 2.52
SMARCD3-201ENST00000262188 ARHGEF6Q15052 776 aa30.8■■■□□ 2.52
SMARCD3-201ENST00000262188 DUSP28Q4G0W2 176 aa30.8■■■□□ 2.52
SMARCD3-201ENST00000262188 ZNF746Q6NUN9 644 aaPredicted RBP30.8■■■□□ 2.52
SMARCD3-201ENST00000262188 TPH2Q8IWU9 490 aa30.8■■■□□ 2.52
SMARCD3-201ENST00000262188 WDR64B1ANS9 1081 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 MBD3O95983 291 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 EPHA7Q15375 998 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 SKOR2Q2VWA4 1001 aaPredicted RBP30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 IQSEC1Q6DN90 963 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 HSD17B14Q9BPX1 270 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 KIAA1024Q9UPX6 916 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 GSTTP1A0A1W2PQM5 241 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 ZBTB39O15060 712 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 CAMK4Q16566 473 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 NAALADL2Q58DX5 795 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 CAVIN1Q6NZI2 390 aaKnown RBP30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 GRAMD1CQ8IYS0 662 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 SH3TC2Q8TF17 1288 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 STAMQ92783 540 aa30.79■■■□□ 2.52
SMARCD3-201ENST00000262188 HMGCRP04035 888 aa30.78■■■□□ 2.52
SMARCD3-201ENST00000262188 PSMC6P62333 389 aa30.78■■■□□ 2.52
SMARCD3-201ENST00000262188 E2F4Q16254 413 aa30.78■■■□□ 2.52
SMARCD3-201ENST00000262188 ABHD15Q6UXT9 468 aa30.78■■■□□ 2.52
SMARCD3-201ENST00000262188 GIMAP8Q8ND71 665 aaPredicted RBP30.78■■■□□ 2.52
SMARCD3-201ENST00000262188 ERMNQ8TAM6 284 aa30.78■■■□□ 2.52
SMARCD3-201ENST00000262188 DDX19AQ9NUU7 478 aaKnown RBP30.78■■■□□ 2.52
SMARCD3-201ENST00000262188 GH1P01241 217 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 KLHL40Q2TBA0 621 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 SWSAP1Q6NVH7 229 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 CCDC60Q8IWA6 550 aaPredicted RBP30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 AFG1LQ8WV93 481 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 CALML4Q96GE6 196 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 CDK5RAP3Q96JB5 506 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 LXNQ9BS40 222 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 TMEM63CQ9P1W3 806 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 PCDHA10Q9Y5I2 948 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 RPA1P27694 616 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 JAK3P52333 1124 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 RRAGBQ5VZM2 374 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 OR6J1Q8NGC5 347 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 ERCC4Q92889 916 aaPredicted RBP30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 GPR20Q99678 358 aa30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 GNEQ9Y223 722 aaKnown RBP30.77■■■□□ 2.52
SMARCD3-201ENST00000262188 E9PMD0 336 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 DYNC1LI2O43237 492 aaPredicted RBP30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 ACTN4O43707 911 aaKnown RBP30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 ZNF500O60304 480 aaPredicted RBP30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 STAT6P42226 847 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 TMEM119Q4V9L6 283 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 HAUS3Q68CZ6 603 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 TRIM50Q86XT4 487 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 TRMT44Q8IYL2 757 aaKnown RBP30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 GABBR1Q9UBS5 961 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 FAM184BQ9ULE4 1060 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 PTPN22Q9Y2R2 807 aa30.76■■■□□ 2.51
SMARCD3-201ENST00000262188 TMEM150BA6NC51 233 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 NOP56O00567 594 aaKnown RBP30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 MYCP01106 439 aaPredicted RBP30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 INHAP05111 366 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 ZSCAN20P17040 1043 aaPredicted RBP30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 GRK4P32298 578 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 TCF7P36402 384 aaPredicted RBP30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 DHX8Q14562 1220 aaKnown RBP30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 PXYLP1Q8TE99 480 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 PIGOQ8TEQ8 1089 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 PCYT2Q99447 389 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 POLR3CQ9BUI4 534 aaPredicted RBP30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 CCDC39Q9UFE4 941 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 SUPT20HL2P0C7V6 817 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 SFNP31947 248 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 ANP32BQ92688 251 aaKnown RBP30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 BLOC1S4Q9NUP1 217 aa30.75■■■□□ 2.51
SMARCD3-201ENST00000262188 BACH1O14867 736 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 KINO60870 393 aaKnown RBP30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 CASP1P29466 404 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 TLK2Q86UE8 772 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 SH2D3AQ9BRG2 576 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 ATG7O95352 703 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 AKR1A1P14550 325 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 LAMC2Q13753 1193 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 HYIQ5T013 277 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 MIS18BP1Q6P0N0 1132 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 PDXDC2PQ6P474 469 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 KRBA2Q6ZNG9 492 aa30.74■■■□□ 2.51
SMARCD3-201ENST00000262188 P4HBP07237 508 aaKnown RBP30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 PSAPP07602 524 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 PRMT2P55345 433 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 MAP3K21Q5TCX8 1036 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 SLAIN1Q8ND83 568 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 CNNM3Q8NE01 707 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 SEPT1Q8WYJ6 367 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 MTRQ99707 1265 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 WDR81Q562E7 1941 aa30.73■■■□□ 2.51
SMARCD3-201ENST00000262188 ZNF862O60290 1169 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms