RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 CGGBP1Q9UFW8 167 aaPredicted RBP4.6□□□□□ -1.67
CDRT1-201ENST00000261644 DDX41Q9UJV9 622 aaKnown RBP4.6□□□□□ -1.67
CDRT1-201ENST00000261644 LTBP3Q9NS15 1303 aa4.6□□□□□ -1.67
CDRT1-201ENST00000261644 ANKRD36BQ8N2N9 1353 aa4.6□□□□□ -1.67
CDRT1-201ENST00000261644 ADGRB1O14514 1584 aa4.6□□□□□ -1.67
CDRT1-201ENST00000261644 CDC42BPGQ6DT37 1551 aa4.6□□□□□ -1.67
CDRT1-201ENST00000261644 INO80Q9ULG1 1556 aaPredicted RBP4.6□□□□□ -1.67
CDRT1-201ENST00000261644 C2orf71A6NGG8 1288 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 C9orf118A6NHY6 69 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 GOLGA6L22H0YM25 854 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 KIF1BO60333 1816 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 PPP1R11O60927 126 aaPredicted RBP4.59□□□□□ -1.67
CDRT1-201ENST00000261644 PPM1BO75688 479 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 SLC6A11P48066 632 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 SEPHS1P49903 392 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 AMPD2Q01433 879 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 RABEP1Q15276 862 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 SURF1Q15526 300 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 NAALADL2Q58DX5 795 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 PRR31Q5SQ13 230 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 BORAQ6PGQ7 559 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 ZFYVE16Q7Z3T8 1539 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 FAM124AQ86V42 546 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 CHD1LQ86WJ1 897 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 TTLL6Q8N841 843 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 TNPO1Q92973 898 aaKnown RBP4.59□□□□□ -1.67
CDRT1-201ENST00000261644 DVL3Q92997 716 aaPredicted RBP4.59□□□□□ -1.67
CDRT1-201ENST00000261644 MMP19Q99542 508 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 GORASP1Q9BQQ3 440 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 TINF2Q9BSI4 451 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 SLKQ9H2G2 1235 aaPredicted RBP4.59□□□□□ -1.67
CDRT1-201ENST00000261644 NGRNQ9NPE2 291 aaKnown RBP4.59□□□□□ -1.67
CDRT1-201ENST00000261644 SRRDQ9UH36 339 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 RWDD3Q9Y3V2 267 aa4.59□□□□□ -1.67
CDRT1-201ENST00000261644 ZC3H13Q5T200 1668 aaKnown RBP4.58□□□□□ -1.68
CDRT1-201ENST00000261644 ADGRB3O60242 1522 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 COL3A1P02461 1466 aaPredicted RBP4.58□□□□□ -1.68
CDRT1-201ENST00000261644 SPAG9O60271 1321 aaKnown RBP4.58□□□□□ -1.68
CDRT1-201ENST00000261644 STXBP3O00186 592 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 DYNC1I1O14576 645 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 NPHS1O60500 1241 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 ZNF853P0CG23 659 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 TRIM27P14373 513 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 TMPOP42166 694 aaKnown RBP4.58□□□□□ -1.68
CDRT1-201ENST00000261644 GJA8P48165 433 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 SOX9P48436 509 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 MCM2P49736 904 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 MTHFSP49914 203 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 HEATR6Q6AI08 1181 aaKnown RBP4.58□□□□□ -1.68
CDRT1-201ENST00000261644 ETV3LQ6ZN32 361 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 RUFY4Q6ZNE9 571 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 MORC1Q86VD1 984 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 ANKRD13AQ8IZ07 590 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 ZNF654Q8IZM8 581 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 Q8N1Y9 231 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 PLEKHO2Q8TD55 490 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 COPS5Q92905 334 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 TRIM44Q96DX7 344 aaPredicted RBP4.58□□□□□ -1.68
CDRT1-201ENST00000261644 PPT2Q9UMR5 302 aa4.58□□□□□ -1.68
CDRT1-201ENST00000261644 MROH1Q8NDA8 1641 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 ABCC3O15438 1527 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 EFCAB6Q5THR3 1501 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 PTCH1Q13635 1447 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 EVC2Q86UK5 1308 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 NPHP3-ACAD11A0A0J9YXS1 232 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 C7orf72A4D263 438 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 MROH6A6NGR9 719 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 GTF2F1P35269 517 aaKnown RBP eCLIP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 GIPRP48546 466 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 SLC7A5Q01650 507 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 GNL2Q13823 731 aaKnown RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 PPP2R5DQ14738 602 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 UTP14CQ5TAP6 766 aaKnown RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 GAS2L3Q86XJ1 694 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 RIOX2Q8IUF8 465 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 RPAP2Q8IXW5 612 aaPredicted RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 SMAP1Q8IYB5 467 aaPredicted RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 CCDC146Q8IYE0 955 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 ZNF513Q8N8E2 541 aaPredicted RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 RASGRP4Q8TDF6 673 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 SSH1Q8WYL5 1049 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 SEC14L1Q92503 715 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 ANP32BQ92688 251 aaKnown RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 DDX11Q96FC9 970 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 PKNOX2Q96KN3 472 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 DRC1Q96MC2 740 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 C8orf49Q96NF6 230 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 SORCS2Q96PQ0 1159 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 BCAS3Q9H6U6 928 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 DCTPP1Q9H773 170 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 CCSER2Q9H7U1 834 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 GULP1Q9UBP9 304 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 TSC22D4Q9Y3Q8 395 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 ZCCHC11Q5TAX3 1644 aaKnown RBP4.57□□□□□ -1.68
CDRT1-201ENST00000261644 ABCA9Q8IUA7 1624 aa4.57□□□□□ -1.68
CDRT1-201ENST00000261644 MLH3Q9UHC1 1453 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 NSD3Q9BZ95 1437 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 PPLO60437 1756 aa4.56□□□□□ -1.68
CDRT1-201ENST00000261644 ADGRF5Q8IZF2 1346 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms