RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 TMEM206Q9H813 350 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 TRIM33Q9UPN9 1127 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 MFAP3LO75121 409 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 MMEP08473 750 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 KRT80Q6KB66 452 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 KLHL29Q96CT2 875 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 EDC3Q96F86 508 aaKnown RBP12.55□□□□□ -0.4
SORL1-201ENST00000260197 RPS6KC1Q96S38 1066 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 ZNF577Q9BSK1 485 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 CRLF3Q8IUI8 442 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 EEF1DP29692 281 aaKnown RBP12.55□□□□□ -0.4
SORL1-201ENST00000260197 TBK1Q9UHD2 729 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 RFX7Q2KHR2 1363 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 CAV1Q03135 178 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 DARS2Q6PI48 645 aaKnown RBP12.55□□□□□ -0.4
SORL1-201ENST00000260197 KIFC3Q9BVG8 833 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 DIS3Q9Y2L1 958 aaKnown RBP12.55□□□□□ -0.4
SORL1-201ENST00000260197 GNGT2O14610 69 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 PRPSAP2O60256 369 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 GPC4O75487 556 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 MT-ND3P03897 115 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 PABPC4Q13310 644 aaKnown RBP eCLIP12.55□□□□□ -0.4
SORL1-201ENST00000260197 TAF11Q15544 211 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 MMS22LQ6ZRQ5 1243 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 PI4K2BQ8TCG2 481 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 TMEM60Q9H2L4 133 aa12.55□□□□□ -0.4
SORL1-201ENST00000260197 TMEM232C9JQI7 657 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 ADCK5Q3MIX3 580 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 SPOPLQ6IQ16 392 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 DBNLQ9UJU6 430 aaKnown RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 MOCS3O95396 460 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 CYP4A11Q02928 519 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 CDHR1Q96JP9 859 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 PLAAQ9Y263 795 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 NVLO15381 856 aaKnown RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 ANGPTL3Q9Y5C1 460 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 XPOTO43592 962 aaKnown RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 RSRC2Q7L4I2 434 aaKnown RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 DNAAF3Q8N9W5 541 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 MID2Q9UJV3 735 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 MAGEA9P43362 315 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 PARD6BQ9BYG5 372 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 WDR11Q9BZH6 1224 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 C4orf50Q6ZRC1 276 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 FGGP02679 453 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 PCGF5Q86SE9 256 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 DLC1Q96QB1 1528 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 TMED1Q13445 227 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
SORL1-201ENST00000260197 UBE2TQ9NPD8 197 aaPredicted RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 NFU1Q9UMS0 254 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 TJP3O95049 919 aa12.54□□□□□ -0.4
SORL1-201ENST00000260197 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
SORL1-201ENST00000260197 IFRD2Q12894 506 aaPredicted RBP12.53□□□□□ -0.4
SORL1-201ENST00000260197 SPARCL1Q14515 664 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 SCINQ9Y6U3 715 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 CHRNDQ07001 517 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 BBS5Q8N3I7 341 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 SPAG7O75391 227 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 SLCO1A2P46721 670 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 TFAMQ00059 246 aaKnown RBP12.53□□□□□ -0.4
SORL1-201ENST00000260197 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 ARL13BQ3SXY8 428 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 ANTXR1Q9H6X2 564 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 C16orf87Q6PH81 154 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 TOGARAM2Q6ZUX3 1019 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 CALN1Q9BXU9 219 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 GPR108Q9NPR9 543 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 BASP1P80723 227 aaKnown RBP12.53□□□□□ -0.4
SORL1-201ENST00000260197 SNX1Q13596 522 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 TAF1BQ53T94 588 aaPredicted RBP12.53□□□□□ -0.4
SORL1-201ENST00000260197 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
SORL1-201ENST00000260197 AKT3Q9Y243 479 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 PDE8BO95263 885 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 NT5C2P49902 561 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.53□□□□□ -0.4
SORL1-201ENST00000260197 SPTLC3Q9NUV7 552 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 MIA3Q5JRA6 1907 aa12.53□□□□□ -0.4
SORL1-201ENST00000260197 RHOT2Q8IXI1 618 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 WDR19Q8NEZ3 1342 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 MXI1P50539 228 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 SLFN13Q68D06 897 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 CHEK2O96017 543 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 ARL4AP40617 200 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 SRPRBQ9Y5M8 271 aaKnown RBP12.52□□□□□ -0.4
SORL1-201ENST00000260197 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.4
SORL1-201ENST00000260197 MAN1A2O60476 641 aa12.52□□□□□ -0.41
SORL1-201ENST00000260197 PAMP19021 973 aa12.52□□□□□ -0.41
SORL1-201ENST00000260197 CDR2Q01850 454 aa12.52□□□□□ -0.41
SORL1-201ENST00000260197 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms