RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 SUPT20HL2P0C7V6 817 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
GYPC-201ENST00000259254 AKR1A1P14550 325 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 PTGS1P23219 599 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 GJA8P48165 433 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 ARHGAP1Q07960 439 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 CACNB2Q08289 660 aaPredicted RBP17.47■□□□□ 0.39
GYPC-201ENST00000259254 GRB10Q13322 594 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 LAMC2Q13753 1193 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
GYPC-201ENST00000259254 POTEBQ6S5H4 581 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 CATSPER3Q86XQ3 398 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 BANK1Q8NDB2 785 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 CNNM3Q8NE01 707 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 SYAP1Q96A49 352 aaPredicted RBP17.47■□□□□ 0.39
GYPC-201ENST00000259254 PNMA5Q96PV4 448 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 POLR3CQ9BUI4 534 aaPredicted RBP17.47■□□□□ 0.39
GYPC-201ENST00000259254 NT5C3AQ9H0P0 336 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 TUFT1Q9NNX1 390 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 SERTAD1Q9UHV2 236 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 TELO2Q9Y4R8 837 aa17.47■□□□□ 0.39
GYPC-201ENST00000259254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.46■□□□□ 0.39
GYPC-201ENST00000259254 P4HBP07237 508 aaKnown RBP17.46■□□□□ 0.39
GYPC-201ENST00000259254 CYBAP13498 195 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 RPA1P27694 616 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 SNW1Q13573 536 aaKnown RBP17.46■□□□□ 0.39
GYPC-201ENST00000259254 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 TMEM119Q4V9L6 283 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 SWSAP1Q6NVH7 229 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 POTEGQ6S5H5 508 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 TRPV1Q8NER1 839 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 SEPT1Q8WYJ6 367 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 CCDC34Q96HJ3 373 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 LXNQ9BS40 222 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 AP5M1Q9H0R1 490 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 NUP62CLQ9H1M0 184 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 GABBR1Q9UBS5 961 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 USP25Q9UHP3 1055 aa17.46■□□□□ 0.39
GYPC-201ENST00000259254 DYNC1LI2O43237 492 aaPredicted RBP17.45■□□□□ 0.38
GYPC-201ENST00000259254 SLITRK3O94933 977 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 SSBP05455 408 aaKnown RBP eCLIP17.45■□□□□ 0.38
GYPC-201ENST00000259254 SPATA31C1P0DKV0 1188 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 TCF7P36402 384 aaPredicted RBP17.45■□□□□ 0.38
GYPC-201ENST00000259254 QARSP47897 775 aaKnown RBP17.45■□□□□ 0.38
GYPC-201ENST00000259254 HSDL1Q3SXM5 330 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 UTP14CQ5TAP6 766 aaKnown RBP17.45■□□□□ 0.38
GYPC-201ENST00000259254 ABHD15Q6UXT9 468 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 KRBA2Q6ZNG9 492 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 U2AF1L4Q8WU68 220 aaKnown RBP17.45■□□□□ 0.38
GYPC-201ENST00000259254 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 LENG1Q96BZ8 264 aaPredicted RBP17.45■□□□□ 0.38
GYPC-201ENST00000259254 GPR20Q99678 358 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 HSD17B14Q9BPX1 270 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 AZI2Q9H6S1 392 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 ZSWIM4Q9H7M6 989 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 STK17AQ9UEE5 414 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
GYPC-201ENST00000259254 GSTTP1A0A1W2PQM5 241 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 ADCY6O43306 1168 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 DKC1O60832 514 aaKnown RBP eCLIP17.44■□□□□ 0.38
GYPC-201ENST00000259254 PSMC5P62195 406 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 DHX8Q14562 1220 aaKnown RBP17.44■□□□□ 0.38
GYPC-201ENST00000259254 E2F4Q16254 413 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 CAMK4Q16566 473 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 ECM1Q16610 540 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 HYIQ5T013 277 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 CCDC183Q5T5S1 534 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 FAM160B1Q5W0V3 765 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 TLK2Q86UE8 772 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 AFG1LQ8WV93 481 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 TIGD1Q96MW7 591 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 CUEDC2Q9H467 287 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 CLSTN2Q9H4D0 955 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 PAK6Q9NQU5 681 aaPredicted RBP17.44■□□□□ 0.38
GYPC-201ENST00000259254 ZNF302Q9NR11 478 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 HOOK1Q9UJC3 728 aaKnown RBP17.44■□□□□ 0.38
GYPC-201ENST00000259254 DNM3Q9UQ16 869 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 TCHHQ07283 1943 aa17.44■□□□□ 0.38
GYPC-201ENST00000259254 A0A087WWV3 80 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 E9PMD0 336 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 SEPT4O43236 478 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 ACTN4O43707 911 aaKnown RBP17.43■□□□□ 0.38
GYPC-201ENST00000259254 ATG7O95352 703 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 SGPL1O95470 568 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 SLFN14P0C7P3 912 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 CCND3P30281 292 aaPredicted RBP17.43■□□□□ 0.38
GYPC-201ENST00000259254 UGCGQ16739 394 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 KANK3Q6NY19 840 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
GYPC-201ENST00000259254 CCDC60Q8IWA6 550 aaPredicted RBP17.43■□□□□ 0.38
GYPC-201ENST00000259254 CKAP2LQ8IYA6 745 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 PPTC7Q8NI37 304 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 RAD54LQ92698 747 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 GLG1Q92896 1179 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 EMID1Q96A84 441 aaPredicted RBP17.43■□□□□ 0.38
GYPC-201ENST00000259254 CCDC43Q96MW1 224 aaKnown RBP17.43■□□□□ 0.38
GYPC-201ENST00000259254 NACC1Q96RE7 527 aa17.43■□□□□ 0.38
GYPC-201ENST00000259254 TNMDQ9H2S6 317 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms