RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 CCNT1O60563 726 aaKnown RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 GNA14O95837 355 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 CHN1P15882 459 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 TECP42680 631 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 DYNLL1P63167 89 aaKnown RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 ORC2Q13416 577 aaPredicted RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 FAM47AQ5JRC9 791 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 LRRC57Q8N9N7 239 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 PGM2Q96G03 612 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 L3MBTL3Q96JM7 780 aaPredicted RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 MMTAG2Q9BU76 263 aaKnown RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 MOV10L1Q9BXT6 1211 aaKnown RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 SPATS2LQ9NUQ6 558 aaKnown RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 ASAP1Q9ULH1 1129 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 A0A1B0GUL6 1792 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 MMP13P45452 471 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 CROCCP2Q86T23 111 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 TBC1D1Q86TI0 1168 aaPredicted RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 ZNF483Q8TF39 744 aaPredicted RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 LARP4BQ92615 738 aaKnown RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 FMO2Q99518 471 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 RAB17Q9H0T7 212 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 HOMER3Q9NSC5 361 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 PNMA2Q9UL42 364 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 CICQ96RK0 1608 aaPredicted RBP12.55□□□□□ -0.4
TROAP-201ENST00000257909 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
TROAP-201ENST00000257909 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 STXBP3O00186 592 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 CAND2O75155 1236 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 NUDT17P0C025 328 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
TROAP-201ENST00000257909 CCND1P24385 295 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
TROAP-201ENST00000257909 NT5C2P49902 561 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 NONOQ15233 471 aaKnown RBP eCLIP12.54□□□□□ -0.4
TROAP-201ENST00000257909 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 HEATR3Q7Z4Q2 680 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 MYOCDQ8IZQ8 938 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
TROAP-201ENST00000257909 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 TXLNGYQ9BZA5 131 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 TTI1O43156 1089 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
TROAP-201ENST00000257909 ZNF131P52739 623 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 ARID5AQ03989 594 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 GRM4Q14833 912 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 PPP2R5EQ16537 467 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
TROAP-201ENST00000257909 DYMQ7RTS9 669 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 DGKHQ86XP1 1220 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 SYCE1Q8N0S2 351 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 AGAP11Q8TF27 550 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 SAAL1Q96ER3 474 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 KCNMB3Q9NPA1 279 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 BLOC1S4Q9NUP1 217 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 SUCLA2Q9P2R7 463 aaPredicted RBP12.54□□□□□ -0.4
TROAP-201ENST00000257909 ATP8A1Q9Y2Q0 1164 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 ZNF804BA4D1E1 1349 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 LAMB1P07942 1786 aa12.54□□□□□ -0.4
TROAP-201ENST00000257909 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 COL4A1P02462 1669 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 ERVV-1B6SEH8 477 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 TRAF5O00463 557 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 NQO1P15559 274 aaKnown RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 MARSP56192 900 aaKnown RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 GRB10Q13322 594 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 CAPRIN2Q6IMN6 1127 aaKnown RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 GBP7Q8N8V2 638 aaPredicted RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 PNMA1Q8ND90 353 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 SELENOSQ9BQE4 189 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 L3MBTL1Q9Y468 752 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
TROAP-201ENST00000257909 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 IL2RBP14784 551 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 ANXA13P27216 316 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 SLFN11Q7Z7L1 901 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 LRRC34Q8IZ02 419 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 TPCN2Q8NHX9 752 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 ACSBG1Q96GR2 724 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 ELAC2Q9BQ52 826 aaKnown RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 ZMYND12Q9H0C1 365 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 PRDM11Q9NQV5 511 aa12.53□□□□□ -0.4
TROAP-201ENST00000257909 INTS9Q9NV88 658 aaKnown RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 ARPP21Q9UBL0 812 aaPredicted RBP12.53□□□□□ -0.4
TROAP-201ENST00000257909 SEPT2Q15019 361 aa12.52□□□□□ -0.4
TROAP-201ENST00000257909 FAM133BQ5BKY9 247 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms