RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 ZNF189O75820 626 aaPredicted RBP12.4□□□□□ -0.42
PDE6B-201ENST00000255622 IMPDH2P12268 514 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 SPA17Q15506 151 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 EZH2Q15910 746 aaKnown RBP12.4□□□□□ -0.42
PDE6B-201ENST00000255622 KRT79Q5XKE5 535 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 SDR16C5Q8N3Y7 309 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 COG1Q8WTW3 980 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 TRIM4Q9C037 500 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 TANGO6Q9C0B7 1094 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 YIPF3Q9GZM5 350 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 STK17AQ9UEE5 414 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 SALL4Q9UJQ4 1053 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 PCDHA13Q9Y5I0 950 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 CHUKO15111 745 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 CDR1P51861 262 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
PDE6B-201ENST00000255622 DDR1Q08345 913 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 ASPRV1Q53RT3 343 aa12.4□□□□□ -0.42
PDE6B-201ENST00000255622 RIN2Q8WYP3 895 aaPredicted RBP12.4□□□□□ -0.42
PDE6B-201ENST00000255622 MYO1FO00160 1098 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 ZSCAN9O15535 394 aaPredicted RBP12.4□□□□□ -0.43
PDE6B-201ENST00000255622 NCK2O43639 380 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 RTN2O75298 545 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 SNHG28P0DPA3 235 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 INPP5BP32019 993 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 ZNF543Q08ER8 600 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 TMEM62Q0P6H9 643 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 MAN2A1Q16706 1144 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 DOK7Q18PE1 504 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 COBLL1Q53SF7 1204 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 FIGNQ5HY92 759 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.4□□□□□ -0.43
PDE6B-201ENST00000255622 TMC4Q7Z404 712 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 GUF1Q8N442 669 aaKnown RBP12.4□□□□□ -0.43
PDE6B-201ENST00000255622 EHBP1Q8NDI1 1231 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 MMADHCQ9H3L0 296 aaPredicted RBP12.4□□□□□ -0.43
PDE6B-201ENST00000255622 RABL2BQ9UNT1 228 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 FRMD4BQ9Y2L6 1034 aa12.4□□□□□ -0.43
PDE6B-201ENST00000255622 MYH7BA7E2Y1 1941 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 IGKV6D-41A0A0C4DH26 115 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L15C9J2P7 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L13C9JLJ4 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L11C9JVI0 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L19D6RCP7 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L20D6RJB6 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 E9PMD0 336 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 PPP1R12BO60237 982 aaPredicted RBP12.39□□□□□ -0.43
PDE6B-201ENST00000255622 TTLL1O95922 423 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 TUBB4BP68371 445 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 SLC7A5Q01650 507 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 ICA1Q05084 483 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 E2F5Q15329 346 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 TMEM119Q4V9L6 283 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 NFRKBQ6P4R8 1299 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 USP17L6PQ6QN14 398 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 ZNF662Q6ZS27 426 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 NELFCDQ8IXH7 590 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 HDAC7Q8WUI4 952 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 CENPOQ9BU64 300 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 NLRC4Q9NPP4 1024 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 FOCADQ5VW36 1801 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 PVALEFA0A1B0GWK0 134 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 MARCH6O60337 910 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 SHMT1P34896 483 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 MATR3P43243 847 aaKnown RBP eCLIP12.39□□□□□ -0.43
PDE6B-201ENST00000255622 CACNB3P54284 484 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 NFIAQ12857 509 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 COASYQ13057 564 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 ZFPM1Q8IX07 1006 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 SLF2Q8IX21 1173 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 C17orf50Q8WW18 174 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 BAP1Q92560 729 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 GBP3Q9H0R5 595 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 RIC8AQ9NPQ8 531 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 SERPINB13Q9UIV8 391 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 PCDHAC2Q9Y5I4 1007 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 MYH10P35580 1976 aa12.39□□□□□ -0.43
PDE6B-201ENST00000255622 PNMA6FA0A0J9YX94 578 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 AKR1B10O60218 316 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 EHHADHQ08426 723 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 FNBP4Q8N3X1 1017 aaPredicted RBP12.38□□□□□ -0.43
PDE6B-201ENST00000255622 USP40Q9NVE5 1235 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 SUN2Q9UH99 717 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 BUB1O43683 1085 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
PDE6B-201ENST00000255622 STAT3P40763 770 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 PPP1R2P41236 205 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 CLK2P49760 499 aaKnown RBP12.38□□□□□ -0.43
PDE6B-201ENST00000255622 CDK17Q00537 523 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 KCNMA1Q12791 1236 aa12.38□□□□□ -0.43
PDE6B-201ENST00000255622 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms