RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 HSPA6P17066 643 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 FBXL16Q8N461 479 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 PPP1R13BQ96KQ4 1090 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 MTFR1LQ9H019 292 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 MYOZ2Q9NPC6 264 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 SLIT3O75094 1523 aa16.32■□□□□ 0.2
UBE4B-201ENST00000253251 MYO1FO00160 1098 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 KIF11P52732 1056 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 SAMD3Q8N6K7 520 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 EIF3CLB5ME19 914 aaKnown RBP16.31■□□□□ 0.2
UBE4B-201ENST00000253251 EYA4O95677 639 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 FCER1AP12319 257 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 COASYQ13057 564 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 ELF2Q15723 593 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 SND1Q7KZF4 910 aaKnown RBP eCLIP16.31■□□□□ 0.2
UBE4B-201ENST00000253251 MAP7D3Q8IWC1 876 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 EIF3CQ99613 913 aaKnown RBP16.31■□□□□ 0.2
UBE4B-201ENST00000253251 MED10Q9BTT4 135 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
UBE4B-201ENST00000253251 GDAQ9Y2T3 454 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
UBE4B-201ENST00000253251 GUCY1A2P33402 732 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 MYO1EQ12965 1108 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 XXYLT1Q8NBI6 393 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 DYDC2Q96IM9 177 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 KRIT1O00522 736 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 PEX3P56589 373 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 RNASE9P60153 205 aaKnown RBP16.31■□□□□ 0.2
UBE4B-201ENST00000253251 LMNB2Q03252 620 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 SFR1Q86XK3 245 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 CCDC89Q8N998 374 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 KCND2Q9NZV8 630 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 MON2Q7Z3U7 1717 aa16.31■□□□□ 0.2
UBE4B-201ENST00000253251 STXBP3O00186 592 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 TDP2O95551 362 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 PPFIA1Q13136 1202 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 NLRP7Q8WX94 980 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 PKNOX2Q96KN3 472 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 NACA2Q9H009 215 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 ZNF302Q9NR11 478 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 VPS18Q9P253 973 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 POLLQ9UGP5 575 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 HACL1Q9UJ83 578 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 ABT1Q9ULW3 272 aaKnown RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 FKBP1AP62942 108 aaKnown RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 KNOP1Q1ED39 458 aaKnown RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 PAIP2Q9BPZ3 127 aaKnown RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 RPF1Q9H9Y2 349 aaKnown RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 KIAA0391O15091 583 aaKnown RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 PHKA2P46019 1235 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 SARNPP82979 210 aaKnown RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 TSC1Q92574 1164 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 MSTO1Q9BUK6 570 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 EDEM3Q9BZQ6 932 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 MAFGO15525 162 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 MFAP3LO75121 409 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 ZSCAN20P17040 1043 aaPredicted RBP16.3■□□□□ 0.2
UBE4B-201ENST00000253251 CAPN2P17655 700 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 RFX1P22670 979 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 TROAPQ12815 778 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 MMP19Q99542 508 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 NUB1Q9Y5A7 615 aa16.3■□□□□ 0.2
UBE4B-201ENST00000253251 GOLGA6CA6NDK9 693 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 GOLGA6BA6NDN3 693 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 E9PMD0 336 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 NR3C1P04150 777 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 GOLGA6DP0CG33 693 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 CCDC63Q8NA47 563 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 PCIF1Q9H4Z3 704 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 GOLGA6AQ9NYA3 693 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 PRR12Q9ULL5 1215 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 POTEB3A0JP26 581 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 POTECB2RU33 542 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 GMPSP49915 693 aaPredicted RBP16.29■□□□□ 0.2
UBE4B-201ENST00000253251 POTEBQ6S5H4 581 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 EEPD1Q7L9B9 569 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 METTL23Q86XA0 190 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 EIF2AK1Q9BQI3 630 aaKnown RBP16.29■□□□□ 0.2
UBE4B-201ENST00000253251 CEP72Q9P209 647 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 CAPN9O14815 690 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 KRT81Q14533 505 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 MAPK6Q16659 721 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 PIGOQ8TEQ8 1089 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
UBE4B-201ENST00000253251 NRBP1Q9UHY1 535 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 RASSF7Q02833 373 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 C15orf52Q6ZUT6 534 aaKnown RBP16.29■□□□□ 0.2
UBE4B-201ENST00000253251 P3H4Q92791 437 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 CCDC97Q96F63 343 aaPredicted RBP16.29■□□□□ 0.2
UBE4B-201ENST00000253251 ODF2LQ9ULJ1 636 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 PYCARDQ9ULZ3 195 aa16.29■□□□□ 0.2
UBE4B-201ENST00000253251 HMGCS2P54868 508 aa16.28■□□□□ 0.2
UBE4B-201ENST00000253251 MTMR2Q13614 643 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms