RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 EIF3HO15372 352 aaKnown RBP eCLIP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 LUC7L3O95232 432 aaKnown RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 EPB41P11171 864 aaKnown RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 RPL13P26373 211 aaKnown RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 MAP2K1Q02750 393 aaPredicted RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF174Q15697 407 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CEP85LQ5SZL2 805 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 SFMBT2Q5VUG0 894 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CCNI2Q6ZMN8 369 aaPredicted RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CPLX4Q7Z7G2 160 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 GLIS3Q8NEA6 775 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TUBGCP2Q9BSJ2 902 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 MMRN2Q9H8L6 949 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF408Q9H9D4 720 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 HPCAL4Q9UM19 191 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 FAM169AQ9Y6X4 670 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 PDE2AO00408 941 aaPredicted RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CCT5P48643 541 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 VSNL1P62760 191 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TFAP4Q01664 338 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF543Q08ER8 600 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TCEAL1Q15170 157 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 SNCBQ16143 134 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 GKAP1Q5VSY0 366 aaPredicted RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 GPATCH11Q8N954 259 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CHP1Q99653 195 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TRIM7Q9C029 511 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 GPR88Q9GZN0 384 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 LACRTQ9GZZ8 138 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 MKNK2Q9HBH9 465 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CAPN7Q9Y6W3 813 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 PVALEFA0A1B0GWK0 134 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SSU72P8A0A1W2PR75 194 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 TRIM49BA6NDI0 452 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 PIK3CDO00329 1044 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SART1O43290 800 aaKnown RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ZEB2O60315 1214 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 FLOT1O75955 427 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SPATA31C1P0DKV0 1188 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 NONOQ15233 471 aaKnown RBP eCLIP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 RPS6KA1Q15418 735 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 HSP90AA4PQ58FG1 418 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ANKRD40Q6AI12 368 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 TMC4Q7Z404 712 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 YTHDF3Q7Z739 585 aaKnown RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 CREG2Q8IUH2 290 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 GBP7Q8N8V2 638 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SEC14L1Q92503 715 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 GPKOWQ92917 476 aaPredicted RBP eCLIP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ZDHHC15Q96MV8 337 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SPAG5Q96R06 1193 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 CCDC77Q9BR77 488 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 NT5C3AQ9H0P0 336 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 GANQ9H2C0 597 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 UTP11Q9Y3A2 253 aaKnown RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 MYMKA6NI61 221 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 PPP1R37O75864 691 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 CYP3A4P08684 503 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 JAM2P57087 298 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 LACTBP83111 547 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ARHGEF6Q15052 776 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ASIC2Q16515 512 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 KIAA0753Q2KHM9 967 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 PPP4R3CPQ6ZMV5 832 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 APLFQ8IW19 511 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 MAIP1Q8WWC4 291 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 TBC1D5Q92609 795 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 NLRP3Q96P20 1036 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SH3GL2Q99962 352 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 FAM129AQ9BZQ8 928 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 VEZTQ9HBM0 779 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ARHGAP20Q9P2F6 1191 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 FBXL5Q9UKA1 691 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 RPTORQ8N122 1335 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 MACROD2A1Z1Q3 448 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SHOX2O60902 331 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 BBOX1O75936 387 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ATP2B4P23634 1241 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 MCM7P33993 719 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SLC12A3P55017 1021 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 KIF22Q14807 665 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SHROOM1Q2M3G4 852 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 TPTE2Q6XPS3 522 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 PIK3AP1Q6ZUJ8 805 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 CABP7Q86V35 215 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 ZFPM1Q8IX07 1006 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 GMCL1P1Q8NEA9 526 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 RASGRP4Q8TDF6 673 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 DYDC1Q8WWB3 177 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SYN2Q92777 582 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 CAVIN3Q969G5 261 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 RRP36Q96EU6 259 aaKnown RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 PDCD11Q14690 1871 aaKnown RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 CES2O00748 559 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 BUB1BO60566 1050 aaPredicted RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 SKOR1P84550 965 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 HDLBPQ00341 1268 aaKnown RBP4.54□□□□□ -1.68
UBE4A-201ENST00000252108 KIAA1755Q5JYT7 1200 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 DACT2Q5SW24 774 aa4.54□□□□□ -1.68
UBE4A-201ENST00000252108 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms