RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 F5H6K3 240 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 RPS6KA5O75582 802 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 TRIM37O94972 964 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 FOSP01100 380 aaPredicted RBP23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 NR2F2P24468 414 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 CASP5P51878 434 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 PSMC6P62333 389 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 IRX3P78415 501 aaPredicted RBP23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 KLRC3Q07444 240 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 RAPGEF1Q13905 1077 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 EPM2AIP1Q7L775 607 aaPredicted RBP23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 FBXO11Q86XK2 927 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 GMCL1Q96IK5 515 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 FAM20AQ96MK3 541 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 GDAP1L1Q96MZ0 367 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 ZHX3Q9H4I2 956 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 RNF14Q9UBS8 474 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 DNM3Q9UQ16 869 aa23.8■■□□□ 1.4
SH2D3A-201ENST00000245908 EPS15P42566 896 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 LEKR1Q6ZMV7 388 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 FRMD5Q7Z6J6 570 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 TBC1D5Q92609 795 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 SMARCAL1Q9NZC9 954 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 EHD2Q9NZN4 543 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 NOP2P46087 812 aaKnown RBP23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 ASIC2Q16515 512 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 STRIP1Q5VSL9 837 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 SRLQ86TD4 932 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 REEP2Q9BRK0 252 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 HDAC9Q9UKV0 1011 aa23.79■■□□□ 1.4
SH2D3A-201ENST00000245908 AGPSO00116 658 aa23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 CIITAP33076 1130 aa23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 NAP1L1P55209 391 aaKnown RBP23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 KLHL30Q0D2K2 578 aa23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 PABPC4Q13310 644 aaKnown RBP eCLIP23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 KNOP1Q1ED39 458 aaKnown RBP23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 SYDE2Q5VT97 1194 aa23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 SFR1Q86XK3 245 aa23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 SCN9AQ15858 1988 aa23.78■■□□□ 1.4
SH2D3A-201ENST00000245908 SPDYE3A6NKU9 549 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 FAM86B1E9PN63 330 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 NDUFB10O96000 172 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 FAM86B2P0C5J1 330 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 HMGB2P26583 209 aaKnown RBP23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 TNFRSF8P28908 595 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 GGCXP38435 758 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 SNAP25P60880 206 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 DACT2Q5SW24 774 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 DPY19L2P1Q6NXN4 242 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 FAM133AQ8N9E0 248 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 AFAP1L1Q8TED9 768 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 PLCB1Q9NQ66 1216 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 STIM2Q9P246 746 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 PCDHGC5Q9Y5F6 944 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 A0A087X0T9 212 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 MEIS1O00470 390 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 FAM228BP0C875 321 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 KLRC1P26715 233 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 HOXD13P35453 343 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 MATR3P43243 847 aaKnown RBP eCLIP23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 CFAP221Q4G0U5 840 aa23.77■■□□□ 1.4
SH2D3A-201ENST00000245908 PDXKO00764 312 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 PALMO75781 387 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 ABCB5Q2M3G0 1257 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 USH1GQ495M9 461 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 GLE1Q53GS7 698 aaKnown RBP23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 C10orf67Q8IYJ2 551 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 GOLGA6L1Q8N7Z2 621 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 YY1AP1Q9H869 796 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 RBM12Q9NTZ6 932 aaKnown RBP23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 ARMCX3Q9UH62 379 aaPredicted RBP23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 LCMT1Q9UIC8 334 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 VAV3Q9UKW4 847 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 BRWD3Q6RI45 1802 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 CALUO43852 315 aaPredicted RBP23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 RBM5P52756 815 aaKnown RBP eCLIP23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 BMT2Q1RMZ1 405 aa23.76■■□□□ 1.39
SH2D3A-201ENST00000245908 MSH4O15457 936 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 GDF11O95390 407 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 AFPP02771 609 aaKnown RBP23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 EPHB4P54760 987 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 C8orf74Q6P047 294 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 BTNL9Q6UXG8 535 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 SND1Q7KZF4 910 aaKnown RBP eCLIP23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 RIN2Q8WYP3 895 aaPredicted RBP23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 RRP15Q9Y3B9 282 aaKnown RBP23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 GOLGA6BA6NDN3 693 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 BTNL10A8MVZ5 291 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 OPLAHO14841 1288 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 TRIM66O15016 1216 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 IVLP07476 585 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 MYBP10242 640 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 SLC7A5Q01650 507 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 ARID5AQ03989 594 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 MEI1Q5TIA1 1274 aa23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 COL23A1Q86Y22 540 aaPredicted RBP23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 POLR3CQ9BUI4 534 aaPredicted RBP23.75■■□□□ 1.39
SH2D3A-201ENST00000245908 ADAMTS1Q9UHI8 967 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms