RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 ANKRD42Q8N9B4 389 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 LEMD3Q9Y2U8 911 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 SSTR3P32745 418 aaPredicted RBP12.57□□□□□ -0.4
SOX9-201ENST00000245479 CCDC127Q96BQ5 260 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 MRRFQ96E11 262 aaKnown RBP12.57□□□□□ -0.4
SOX9-201ENST00000245479 EPN3Q9H201 632 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 INTS9Q9NV88 658 aaKnown RBP12.57□□□□□ -0.4
SOX9-201ENST00000245479 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 LRRD1A4D1F6 860 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 RBAK-RBAKDNI3L0D1 243 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 CCNE1P24864 410 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 GRM4Q14833 912 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 ADSSL1Q8N142 457 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 PPFIBP2Q8ND30 876 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 NKIRAS1Q9NYS0 192 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 AFDNP55196 1824 aaKnown RBP12.57□□□□□ -0.4
SOX9-201ENST00000245479 PDE4DIPQ5VU43 2346 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 TTLL1O95922 423 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 PPP1R2P41236 205 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 SARSP49591 514 aaKnown RBP12.57□□□□□ -0.4
SOX9-201ENST00000245479 ZBTB16Q05516 673 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 QRICH1Q2TAL8 776 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 RNF10Q8N5U6 811 aaKnown RBP12.57□□□□□ -0.4
SOX9-201ENST00000245479 HVCN1Q96D96 273 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 FZD1Q9UP38 647 aa12.57□□□□□ -0.4
SOX9-201ENST00000245479 RCCD1A6NED2 376 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ENO4A6NNW6 628 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 PDHBP11177 359 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 KIF11P52732 1056 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 CALCOCO2Q13137 446 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 SLC35G1Q2M3R5 365 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 NBPF9Q3BBW0 867 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 TAB3Q8N5C8 712 aaPredicted RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 WHAMMQ8TF30 809 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ATP8A1Q9Y2Q0 1164 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 PCDHA13Q9Y5I0 950 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 GJA3Q9Y6H8 435 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 RSPH10B2B2RC85 870 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ORC4O43929 436 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 RSPH10BP0C881 870 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ASIC2Q16515 512 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 NAALADL2Q58DX5 795 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 CCDC65Q8IXS2 484 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 U2AF1L4Q8WU68 220 aaKnown RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 SLC40A1Q9NP59 571 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 NOP53Q9NZM5 478 aaKnown RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 TPX2Q9ULW0 747 aaKnown RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 AFF2P51816 1311 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ZSCAN5CA6NGD5 496 aaPredicted RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 ADCY1Q08828 1119 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 CDC37Q16543 378 aaPredicted RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 TMEM132AQ24JP5 1023 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 TAOK1Q7L7X3 1001 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 OSBPL9Q96SU4 736 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 VCXQ9H320 206 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 GOLGA8IPA6NC78 632 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 CCDC160A6NGH7 325 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 GOLGA8JA6NMD2 632 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 LGALS16A8MUM7 142 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 TAF11Q15544 211 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 NPY5RQ15761 445 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 TMED8Q6PL24 325 aaPredicted RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 OGFOD1Q8N543 542 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ARL8AQ96BM9 186 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ZNF668Q96K58 619 aaPredicted RBP12.56□□□□□ -0.4
SOX9-201ENST00000245479 FAM84AQ96KN4 292 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 ATP6V1G3Q96LB4 118 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 CCDC77Q9BR77 488 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 FAM167BQ9BTA0 163 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 DNM3Q9UQ16 869 aa12.56□□□□□ -0.4
SOX9-201ENST00000245479 CETN3O15182 167 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 LUC7L3O95232 432 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 PLA2G4BP0C869 781 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 COPB2P35606 906 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 VPS41P49754 854 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 PSMC6P62333 389 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 DHX9Q08211 1270 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 ARHGEF2Q92974 986 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 ZIM3Q96PE6 472 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 FGFBP2Q9BYJ0 223 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 LRRC27Q9C0I9 530 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
SOX9-201ENST00000245479 CCDC169A6NNP5 214 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 ALDH3A1P30838 453 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 CAPRIN2Q6IMN6 1127 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 TMEM139Q8IV31 216 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 ELAC2Q9BQ52 826 aaKnown RBP12.55□□□□□ -0.4
SOX9-201ENST00000245479 PLCB1Q9NQ66 1216 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 ECE1P42892 770 aa12.55□□□□□ -0.4
SOX9-201ENST00000245479 SESN3P58005 492 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms