RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 PLEKHH3Q7Z736 793 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 DPP9Q86TI2 863 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 POLR3CQ9BUI4 534 aaPredicted RBP14.42□□□□□ -0.1
HIF3A-201ENST00000244302 FLRT1Q9NZU1 646 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 HOOK1Q9UJC3 728 aaKnown RBP14.42□□□□□ -0.1
HIF3A-201ENST00000244302 PPP1R3GB7ZBB8 358 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 IDEP14735 1019 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 GRB14Q14449 540 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 CCL14Q16627 93 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 HAUS3Q68CZ6 603 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
HIF3A-201ENST00000244302 GPBP1Q86WP2 473 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 ERMNQ8TAM6 284 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 HSD3B7Q9H2F3 369 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 TBC1D22BQ9NU19 505 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 DNM3Q9UQ16 869 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 ZNF862O60290 1169 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 SMC2O95347 1197 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 SNAI1O95863 264 aaPredicted RBP14.41□□□□□ -0.1
HIF3A-201ENST00000244302 LRRC41Q15345 812 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 SWSAP1Q6NVH7 229 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 MAEAQ7L5Y9 396 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 GTF3C2Q8WUA4 911 aaPredicted RBP14.41□□□□□ -0.1
HIF3A-201ENST00000244302 EEF2KMTQ96G04 330 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 PRIMPOLQ96LW4 560 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 GSDMAQ96QA5 445 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 NT5C3AQ9H0P0 336 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 JPH1Q9HDC5 661 aaPredicted RBP14.41□□□□□ -0.1
HIF3A-201ENST00000244302 SLC39A2Q9NP94 309 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 STK17AQ9UEE5 414 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 IVNS1ABPQ9Y6Y0 642 aa14.41□□□□□ -0.1
HIF3A-201ENST00000244302 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.4□□□□□ -0.1
HIF3A-201ENST00000244302 PRCPP42785 496 aa14.4□□□□□ -0.1
HIF3A-201ENST00000244302 NPEPPSP55786 919 aa14.4□□□□□ -0.1
HIF3A-201ENST00000244302 ACTR2P61160 394 aa14.4□□□□□ -0.1
HIF3A-201ENST00000244302 PLA2G4FQ68DD2 849 aa14.4□□□□□ -0.1
HIF3A-201ENST00000244302 CCDC60Q8IWA6 550 aaPredicted RBP14.4□□□□□ -0.1
HIF3A-201ENST00000244302 PYM1Q9BRP8 204 aaKnown RBP14.4□□□□□ -0.1
HIF3A-201ENST00000244302 CYP2B6P20813 491 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 ICAM3P32942 547 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 COPB2P35606 906 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 APLP1P51693 650 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 PMS1P54277 932 aaKnown RBP14.39□□□□□ -0.11
HIF3A-201ENST00000244302 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
HIF3A-201ENST00000244302 HSDL1Q3SXM5 330 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 GNPTABQ3T906 1256 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 MAML3Q96JK9 1138 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 CUEDC2Q9H467 287 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 ZFYVE28Q9HCC9 887 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 GABBR1Q9UBS5 961 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 DDX41Q9UJV9 622 aaKnown RBP14.39□□□□□ -0.11
HIF3A-201ENST00000244302 KDM3AQ9Y4C1 1321 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 ADCY6O43306 1168 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 FARP2O94887 1054 aaPredicted RBP14.39□□□□□ -0.11
HIF3A-201ENST00000244302 GGPS1O95749 300 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 P4HBP07237 508 aaKnown RBP14.39□□□□□ -0.11
HIF3A-201ENST00000244302 ATP1A3P13637 1013 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 ATP4AP20648 1035 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 INHBEP58166 350 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 PTPN21Q16825 1174 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 RINT1Q6NUQ1 792 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 TAPT1Q6NXT6 567 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 SYT2Q8N9I0 419 aaPredicted RBP14.39□□□□□ -0.11
HIF3A-201ENST00000244302 KIAA0895Q8NCT3 520 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 ZHX3Q9H4I2 956 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 TUFT1Q9NNX1 390 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 SPTLC3Q9NUV7 552 aa14.39□□□□□ -0.11
HIF3A-201ENST00000244302 GSTTP1A0A1W2PQM5 241 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 TRIM49BA6NDI0 452 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 ZSWIM8A7E2V4 1837 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 MAFGO15525 162 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 CA12O43570 354 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 STRNO43815 780 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 EYA4O95677 639 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 ADCYAP1R1P41586 468 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 SOX10P56693 466 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 SREBF2Q12772 1141 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 GIT2Q14161 759 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 MORN1Q5T089 497 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 CCDC62Q6P9F0 684 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 MAMDC4Q6UXC1 1216 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 ABHD15Q6UXT9 468 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 HHIPL1Q96JK4 782 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 PCYT2Q99447 389 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 REEP2Q9BRK0 252 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 KATNBL1Q9H079 304 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 FANCLQ9NW38 375 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 PCDHA10Q9Y5I2 948 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 PLXNB2O15031 1838 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 SYNGAP1Q96PV0 1343 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 GOLGA6L6A8MZA4 724 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 WDR64B1ANS9 1081 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 RHOBTB3O94955 611 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 STBD1O95210 358 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 MAPK4P31152 587 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 CYP2C19P33261 490 aa14.38□□□□□ -0.11
HIF3A-201ENST00000244302 QARSP47897 775 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms