RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 RNF8O76064 485 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 ECEL1O95672 775 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 FAM153BP0C7A2 387 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 GHRP10912 638 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 PCP11498 1178 aaKnown RBP21.78■■□□□ 1.08
HOXC13-201ENST00000243056 LMNB1P20700 586 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 MATR3P43243 847 aaKnown RBP eCLIP21.78■■□□□ 1.08
HOXC13-201ENST00000243056 CTCFP49711 727 aaPredicted RBP21.78■■□□□ 1.08
HOXC13-201ENST00000243056 FAM153CQ494X1 144 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 HAUS3Q68CZ6 603 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 CREG2Q8IUH2 290 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 CACNA2D3Q8IZS8 1091 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 FAM153AQ9UHL3 310 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 C5orf60A6NFR6 353 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 CLTAP09496 248 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 GOLGA8HP0CJ92 632 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 CCT6AP40227 531 aaKnown RBP21.78■■□□□ 1.08
HOXC13-201ENST00000243056 RIPK1Q13546 671 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 RTN1Q16799 776 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 DLK2Q6UY11 383 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 SLC26A6Q9BXS9 759 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 JADE2Q9NQC1 790 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 STIM2Q9P246 746 aa21.78■■□□□ 1.08
HOXC13-201ENST00000243056 FOCADQ5VW36 1801 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 HLA-DOAP06340 250 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 IDEP14735 1019 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 ERCC5P28715 1186 aaPredicted RBP21.77■■□□□ 1.08
HOXC13-201ENST00000243056 SPATA1Q5VX52 437 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 KLHL10Q6JEL2 608 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 STAG2Q8N3U4 1231 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 TMEM47Q9BQJ4 181 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 PANK4Q9NVE7 773 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 CNTNAP1P78357 1384 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 ECM29Q5VYK3 1845 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 RCCD1A6NED2 376 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 B4DLN1 442 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 CD44P16070 742 aaKnown RBP21.77■■□□□ 1.08
HOXC13-201ENST00000243056 KRT9P35527 623 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 EPS15P42566 896 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 SPDYE2Q495Y8 402 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 MTHFD1LQ6UB35 978 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 PNMA8AQ86V59 439 aaPredicted RBP21.77■■□□□ 1.08
HOXC13-201ENST00000243056 CD302Q8IX05 232 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 KDM4CQ9H3R0 1056 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 SMARCAL1Q9NZC9 954 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 SERTAD1Q9UHV2 236 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 FZD1Q9UP38 647 aa21.77■■□□□ 1.08
HOXC13-201ENST00000243056 SYNRGQ9UMZ2 1314 aa21.77■■□□□ 1.07
HOXC13-201ENST00000243056 ARFGEF1Q9Y6D6 1849 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 VEGFAP15692 232 aaPredicted RBP21.76■■□□□ 1.07
HOXC13-201ENST00000243056 MAGEA8P43361 318 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 MKRN4PQ13434 485 aaPredicted RBP21.76■■□□□ 1.07
HOXC13-201ENST00000243056 ARHGAP22Q7Z5H3 698 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 CATIPQ7Z7H3 387 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 PNMA1Q8ND90 353 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 CCHCR1Q8TD31 782 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 PIDD1Q9HB75 910 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 IMPDH2P12268 514 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 LRRC47Q8N1G4 583 aaKnown RBP21.76■■□□□ 1.07
HOXC13-201ENST00000243056 SPATA4Q8NEY3 305 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 TRPM4Q8TD43 1214 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 OSBPL1AQ9BXW6 950 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 PI4KBQ9UBF8 816 aa21.76■■□□□ 1.07
HOXC13-201ENST00000243056 HMGB1P1B2RPK0 211 aaPredicted RBP21.75■■□□□ 1.07
HOXC13-201ENST00000243056 TNFRSF8P28908 595 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 TMTC2Q8N394 836 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 FAM81AQ8TBF8 368 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 LACRTQ9GZZ8 138 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 TMOD2Q9NZR1 351 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 SLC12A6Q9UHW9 1150 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 ZNF232Q9UNY5 417 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 PCDHGA4Q9Y5G9 962 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 GPR162Q16538 588 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 ELOA2Q8IYF1 753 aaPredicted RBP21.75■■□□□ 1.07
HOXC13-201ENST00000243056 GALNT15Q8N3T1 639 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 CCDC63Q8NA47 563 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 NEDD1Q8NHV4 660 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 CTAGE1Q96RT6 745 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 EHD2Q9NZN4 543 aa21.75■■□□□ 1.07
HOXC13-201ENST00000243056 ANO9A1A5B4 782 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 ZSCAN9O15535 394 aaPredicted RBP21.74■■□□□ 1.07
HOXC13-201ENST00000243056 RAD21O60216 631 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 SMIM24O75264 130 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 TMOD1P28289 359 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 C9orf131Q5VYM1 1079 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 ZNF572Q7Z3I7 529 aaPredicted RBP21.74■■□□□ 1.07
HOXC13-201ENST00000243056 P3H4Q92791 437 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 ZBED3Q96IU2 234 aaPredicted RBP21.74■■□□□ 1.07
HOXC13-201ENST00000243056 DPPA5A6NC42 116 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 CDKL5O76039 1030 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 PPP1R15BQ5SWA1 713 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 TRIML1Q8N9V2 468 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 GORASP1Q9BQQ3 440 aa21.74■■□□□ 1.07
HOXC13-201ENST00000243056 GRIN1Q05586 938 aa21.73■■□□□ 1.07
HOXC13-201ENST00000243056 CUL4BQ13620 913 aa21.73■■□□□ 1.07
HOXC13-201ENST00000243056 TBC1D1Q86TI0 1168 aaPredicted RBP21.73■■□□□ 1.07
HOXC13-201ENST00000243056 CCDC84Q86UT8 332 aaPredicted RBP21.73■■□□□ 1.07
HOXC13-201ENST00000243056 ZNF287Q9HBT7 754 aa21.73■■□□□ 1.07
HOXC13-201ENST00000243056 NFU1Q9UMS0 254 aa21.73■■□□□ 1.07
HOXC13-201ENST00000243056 DUSP10Q9Y6W6 482 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms