RNA–Protein interactions for RNA: ENST00000242783.10

PKN1-201, Transcript of protein kinase N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKN1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-201ENST00000242783 ABCB11O95342 1321 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 SHMT1P34896 483 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 NT5C2P49902 561 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 ITIH3Q06033 890 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 CATSPER3Q86XQ3 398 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 RNPC3Q96LT9 517 aaKnown RBP20.29■□□□□ 0.84
PKN1-201ENST00000242783 hCG_1984214I3L0E3 225 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 EXOC3L4Q17RC7 722 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 ZNF713Q8N859 430 aaPredicted RBP20.29■□□□□ 0.84
PKN1-201ENST00000242783 CYP2W1Q8TAV3 490 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 TBC1D22AQ8WUA7 517 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 KCTD10Q9H3F6 313 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 TSKSQ9UJT2 592 aa20.29■□□□□ 0.84
PKN1-201ENST00000242783 GRIN2DO15399 1336 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 CHMP2AO43633 222 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 SEC24CP53992 1094 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 GABPAQ06546 454 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 MEI1Q5TIA1 1274 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 ALS2CLQ60I27 953 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 KSR1Q8IVT5 923 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 PPM1EQ8WY54 764 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 REEP2Q9BRK0 252 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 DHX36Q9H2U1 1008 aaKnown RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 SEPT11Q9NVA2 429 aaKnown RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 SHOX2O60902 331 aaPredicted RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 GCNT3O95395 438 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 UCHL3P15374 230 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 SLC20A2Q08357 652 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 PRPF4BQ13523 1007 aaKnown RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 ALKBH5Q6P6C2 394 aaKnown RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 ZNF572Q7Z3I7 529 aaPredicted RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 CEP63Q96MT8 703 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 NUCKS1Q9H1E3 243 aaKnown RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 BHMT2Q9H2M3 363 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 PCDHA2Q9Y5H9 948 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 KDM3AQ9Y4C1 1321 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 XRCC5P13010 732 aaKnown RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 CDC37Q16543 378 aaPredicted RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 CERS3Q8IU89 383 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 PIGOQ8TEQ8 1089 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 SH3GL2Q99962 352 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 EDEM3Q9BZQ6 932 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 ZC3H12CQ9C0D7 883 aaKnown RBP20.28■□□□□ 0.84
PKN1-201ENST00000242783 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 NAV1Q8NEY1 1877 aa20.28■□□□□ 0.84
PKN1-201ENST00000242783 SNHG28P0DPA3 235 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 RGL1Q9NZL6 768 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 DNM3Q9UQ16 869 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 PLAAQ9Y263 795 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 DDX60LQ5H9U9 1706 aaKnown RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 GAKO14976 1311 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 BACH1O14867 736 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 AKAP3O75969 853 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 GDF11O95390 407 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 ABCB4P21439 1286 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 CLK2P49760 499 aaKnown RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 TRMT1LQ7Z2T5 733 aaKnown RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 U2AF1L4Q8WU68 220 aaKnown RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 INPP4AQ96PE3 977 aaPredicted RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 P2RX7Q99572 595 aaKnown RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 GANQ9H2C0 597 aa20.27■□□□□ 0.84
PKN1-201ENST00000242783 AJAP1Q9UKB5 411 aaPredicted RBP20.27■□□□□ 0.84
PKN1-201ENST00000242783 TNRC6CQ9HCJ0 1690 aaKnown RBP20.27■□□□□ 0.83
PKN1-201ENST00000242783 GNA14O95837 355 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 HLA-DOAP06340 250 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 EEF2P13639 858 aaKnown RBP20.26■□□□□ 0.83
PKN1-201ENST00000242783 ZNF76P36508 570 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 TNNC1P63316 161 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 SF3A3Q12874 501 aaKnown RBP eCLIP20.26■□□□□ 0.839e-7■■■■■ 44.5
PKN1-201ENST00000242783 TADA2BQ86TJ2 420 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 SPICE1Q8N0Z3 855 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 USP38Q8NB14 1042 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 CAVIN3Q969G5 261 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 GDF3Q9NR23 364 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 KCNQ5Q9NR82 932 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 RREB1Q92766 1687 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 RBAK-RBAKDNI3L0D1 243 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 GFPT2O94808 682 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 GPATCH4Q5T3I0 446 aaKnown RBP20.26■□□□□ 0.83
PKN1-201ENST00000242783 KIAA0825Q8IV33 1275 aa20.26■□□□□ 0.83
PKN1-201ENST00000242783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.26■□□□□ 0.836e-7■■■■■ 50.7
PKN1-201ENST00000242783 AFPP02771 609 aaKnown RBP20.25■□□□□ 0.83
PKN1-201ENST00000242783 ITGA4P13612 1032 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 ERVK-9P63128 1117 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 UBXN2AP68543 259 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 ARHGAP4P98171 946 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 SLFN13Q68D06 897 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 CDC42EP5Q6NZY7 148 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 RBM46Q8TBY0 533 aaKnown RBP20.25■□□□□ 0.83
PKN1-201ENST00000242783 FAM163AQ96GL9 167 aaPredicted RBP20.25■□□□□ 0.83
PKN1-201ENST00000242783 PPANQ9NQ55 473 aaKnown RBP20.25■□□□□ 0.83
PKN1-201ENST00000242783 PCDHGC5Q9Y5F6 944 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 ZBTB39O15060 712 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 NR1D1P20393 614 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 PLS1Q14651 629 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 GLE1Q53GS7 698 aaKnown RBP20.25■□□□□ 0.83
PKN1-201ENST00000242783 FBXW10Q5XX13 1052 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 PEX26Q7Z412 305 aa20.25■□□□□ 0.83
PKN1-201ENST00000242783 DAAM2Q86T65 1068 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms