RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 DAPK3O43293 454 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 ADAM9Q13443 819 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 ODF2Q5BJF6 829 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 AGBL2Q5U5Z8 902 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
DDX55-201ENST00000238146 AMACRQ9UHK6 382 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 NAGPAQ9UK23 515 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 NOVA2Q9UNW9 492 aaKnown RBP16.97■□□□□ 0.31
DDX55-201ENST00000238146 LEMD3Q9Y2U8 911 aa16.97■□□□□ 0.31
DDX55-201ENST00000238146 DCDC2CA8MYV0 355 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 ITGA4P13612 1032 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 EPS15P42566 896 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 TNNI2P48788 182 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
DDX55-201ENST00000238146 WDR66Q8TBY9 1149 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 RAPGEF5Q92565 580 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 SEC16BQ96JE7 1060 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.31
DDX55-201ENST00000238146 C5orf60A6NFR6 353 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 E9PMD0 336 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 hCG_1984214I3L0E3 225 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 KRIT1O00522 736 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 PAEPP09466 180 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 CCDC172P0C7W6 258 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 SLC9A1P19634 815 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 MTMR3Q13615 1198 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 BYSLQ13895 437 aaKnown RBP16.96■□□□□ 0.31
DDX55-201ENST00000238146 IFI16Q16666 785 aaKnown RBP16.96■□□□□ 0.31
DDX55-201ENST00000238146 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 ALKBH5Q6P6C2 394 aaKnown RBP16.96■□□□□ 0.31
DDX55-201ENST00000238146 ZC3H3Q8IXZ2 948 aaKnown RBP16.96■□□□□ 0.31
DDX55-201ENST00000238146 ZNF713Q8N859 430 aaPredicted RBP16.96■□□□□ 0.31
DDX55-201ENST00000238146 TPCN2Q8NHX9 752 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 NLRP3Q96P20 1036 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 EMILIN3Q9NT22 766 aa16.96■□□□□ 0.31
DDX55-201ENST00000238146 MYH4Q9Y623 1939 aa16.96■□□□□ 0.3
DDX55-201ENST00000238146 NPHP3-ACAD11A0A0J9YXS1 232 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 GOLGA6L7A0A1B0GV03 622 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 CCDC188H7C350 402 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 ANKRD20A8PQ5CZ79 823 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 HERC4Q5GLZ8 1057 aaPredicted RBP16.95■□□□□ 0.3
DDX55-201ENST00000238146 TMC3Q7Z5M5 1100 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 RPAINQ86UA6 219 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 CCDC65Q8IXS2 484 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 TMCO5BA8MYB1 307 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 UCHL3P15374 230 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 RDXP35241 583 aaKnown RBP16.95■□□□□ 0.3
DDX55-201ENST00000238146 CDR1P51861 262 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 HSPA2P54652 639 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 MAGOHP61326 146 aaKnown RBP16.95■□□□□ 0.3
DDX55-201ENST00000238146 GSTO1P78417 241 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 FUKQ8N0W3 1084 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 CCDC24Q8N4L8 307 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 MAGOHBQ96A72 148 aaKnown RBP16.95■□□□□ 0.3
DDX55-201ENST00000238146 SPAG5Q96R06 1193 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 LRRC4CQ9HCJ2 640 aa16.95■□□□□ 0.3
DDX55-201ENST00000238146 DDX25Q9UHL0 483 aaKnown RBP16.95■□□□□ 0.3
DDX55-201ENST00000238146 PDHBP11177 359 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 PREPLQ4J6C6 727 aaPredicted RBP16.94■□□□□ 0.3
DDX55-201ENST00000238146 RASGEF1CQ8N431 466 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 BZW2Q9Y6E2 419 aaKnown RBP16.94■□□□□ 0.3
DDX55-201ENST00000238146 CETN3O15182 167 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 TTI1O43156 1089 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 UBE2SQ16763 222 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 HYIQ5T013 277 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 CYB5D1Q6P9G0 228 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 PEX26Q7Z412 305 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 RBM46Q8TBY0 533 aaKnown RBP16.94■□□□□ 0.3
DDX55-201ENST00000238146 SEC14L1Q92503 715 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 TATDN2Q93075 761 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
DDX55-201ENST00000238146 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 PCDHA12Q9UN75 941 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 KIAA1024Q9UPX6 916 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 STXBP5LQ9Y2K9 1186 aa16.94■□□□□ 0.3
DDX55-201ENST00000238146 PLA2G4BP0C869 781 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 NOVP48745 357 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 EDRF1Q3B7T1 1238 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 SMIM5Q71RC9 77 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 SLFN11Q7Z7L1 901 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 SLITRK6Q9H5Y7 841 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 ATAD5Q96QE3 1844 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 NR2F2P24468 414 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 DHX9Q08211 1270 aaKnown RBP16.93■□□□□ 0.3
DDX55-201ENST00000238146 KRT71Q3SY84 523 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 SLC51AQ86UW1 340 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 GPBP1Q86WP2 473 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 CELF4Q9BZC1 486 aaKnown RBP16.93■□□□□ 0.3
DDX55-201ENST00000238146 NT5C3AQ9H0P0 336 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 NENFQ9UMX5 172 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 PHF20L1A8MW92 1017 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 F8VZ95 297 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 MARCH6O60337 910 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 LDHCP07864 332 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 CYP11B2P19099 503 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 PON1P27169 355 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 PRKCIP41743 596 aa16.93■□□□□ 0.3
DDX55-201ENST00000238146 WLSQ5T9L3 541 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms