RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 FGGP02679 453 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 S100A1P23297 94 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 ITGB3BPQ13352 177 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 CATSPER1Q8NEC5 780 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 EAF2Q96CJ1 260 aaPredicted RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 NRBF2Q96F24 287 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 MAFGO15525 162 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 TBCAO75347 108 aaKnown RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 EIF2B2P49770 351 aaKnown RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 CWF19L2Q2TBE0 894 aaKnown RBP13.87□□□□□ -0.19
VAMP4-201ENST00000236192 MTHFD1LQ6UB35 978 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 SLC17A8Q8NDX2 589 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 ATP11BQ9Y2G3 1177 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 ARHGEF10O15013 1369 aa13.87□□□□□ -0.19
VAMP4-201ENST00000236192 ERVK-7P63135 1459 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 M0R2C6 588 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 PTPREP23469 700 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 GJC1P36383 396 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 MCL1Q07820 350 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 AP1B1Q10567 949 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 ADRM1Q16186 407 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 SNX30Q5VWJ9 437 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 DBNDD2Q9BQY9 259 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 ZKSCAN3Q9BRR0 538 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 MYL10Q9BUA6 226 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 SCHIP1Q9P0W5 487 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 RASA4BC9J798 803 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 RASA4O43374 803 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 TARSP26639 723 aaKnown RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 ARPC4P59998 168 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 PDE4BQ07343 736 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 SLC5A9Q2M3M2 681 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 TSGA10IPQ3SY00 556 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 SCG3Q8WXD2 468 aaKnown RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 EURLQ9NYK6 297 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 WDR35Q9P2L0 1181 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 ARMCX3Q9UH62 379 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 TTC37Q6PGP7 1564 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 ELOA2Q8IYF1 753 aaPredicted RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 PPP4R1Q8TF05 950 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 PLEKHG4BQ96PX9 1271 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 OLFML3Q9NRN5 406 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 FRMD4BQ9Y2L6 1034 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 DUOX2Q9NRD8 1548 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 FNTAP49354 379 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 P3H1Q32P28 736 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 OGFOD1Q8N543 542 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 TMCO5AQ8N6Q1 288 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 TSEN2Q8NCE0 465 aaKnown RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 EDC3Q96F86 508 aaKnown RBP13.86□□□□□ -0.19
VAMP4-201ENST00000236192 BABAM1Q9NWV8 329 aa13.86□□□□□ -0.19
VAMP4-201ENST00000236192 TNFRSF8P28908 595 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 ARFIP2P53365 341 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 EZH2Q15910 746 aaKnown RBP13.85□□□□□ -0.19
VAMP4-201ENST00000236192 SRRM1Q8IYB3 904 aaKnown RBP13.85□□□□□ -0.19
VAMP4-201ENST00000236192 EBF2Q9HAK2 575 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 IFT122Q9HBG6 1241 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 SMARCAL1Q9NZC9 954 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 GFAPP14136 432 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 LONP1P36776 959 aaKnown RBP13.85□□□□□ -0.19
VAMP4-201ENST00000236192 STAT2P52630 851 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 SLC34A1Q06495 639 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 B3GNT6Q6ZMB0 384 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 CTAGE3PQ8IX95 158 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 PHACTR1Q9C0D0 580 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 MDM2Q00987 491 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-201ENST00000236192 KIF6Q6ZMV9 814 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 RFX8Q6ZV50 586 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 CENPTQ96BT3 561 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 SERPINI1Q99574 410 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 NOC2LQ9Y3T9 749 aaKnown RBP13.85□□□□□ -0.19
VAMP4-201ENST00000236192 ABCB4P21439 1286 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 IKQ13123 557 aaPredicted RBP13.85□□□□□ -0.19
VAMP4-201ENST00000236192 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
VAMP4-201ENST00000236192 EXOC1LA0A1B0GW35 172 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 RBM47A0AV96 593 aaKnown RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 FOXN1O15353 648 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 KRT4P19013 534 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 STAT1P42224 750 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 RARS2Q5T160 578 aaKnown RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 RNF220Q5VTB9 566 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 CABP7Q86V35 215 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 NUDCD3Q8IVD9 361 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 APPBP2Q92624 585 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 HAO1Q9UJM8 370 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 ANAPC5Q9UJX4 755 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 CPSF1Q10570 1443 aaKnown RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 SP100P23497 879 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 BASP1P80723 227 aaKnown RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 GSTA3Q16772 222 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 POTEEQ6S8J3 1075 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
VAMP4-201ENST00000236192 SLC26A7Q8TE54 656 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 PPP2R3CQ969Q6 453 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 CCNE1P24864 410 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 MPP3Q13368 585 aa13.84□□□□□ -0.19
VAMP4-201ENST00000236192 POLA2Q14181 598 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms