RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 LETM2Q2VYF4 491 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 HSDL1Q3SXM5 330 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 PPP4R3AQ6IN85 833 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 NFRKBQ6P4R8 1299 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 C16orf59Q7L2K0 433 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 CYP2W1Q8TAV3 490 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 GPR20Q99678 358 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 AZI2Q9H6S1 392 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
SF3B6-201ENST00000233468 DDX25Q9UHL0 483 aaKnown RBP12.77□□□□□ -0.37
SF3B6-201ENST00000233468 IGLV3-22A0A075B6J6 115 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 SNPHO15079 494 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 SORBS3O60504 671 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 CCNT1O60563 726 aaKnown RBP12.76□□□□□ -0.37
SF3B6-201ENST00000233468 ATP9AO75110 1047 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 BAG4O95429 457 aaKnown RBP12.76□□□□□ -0.37
SF3B6-201ENST00000233468 HSP90AA1P07900 732 aaKnown RBP12.76□□□□□ -0.37
SF3B6-201ENST00000233468 CDK7P50613 346 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 FOSBP53539 338 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 KRT76Q01546 638 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 SP4Q02446 784 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 GRIN2CQ14957 1233 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 SMAP1Q8IYB5 467 aaPredicted RBP12.76□□□□□ -0.37
SF3B6-201ENST00000233468 C7orf31Q8N865 590 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 SLC43A3Q8NBI5 491 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 RIT2Q99578 217 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.76□□□□□ -0.374e-6■□□□□ 8
SF3B6-201ENST00000233468 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 NOL7Q9UMY1 257 aaKnown RBP12.76□□□□□ -0.37
SF3B6-201ENST00000233468 MYH6P13533 1939 aa12.76□□□□□ -0.37
SF3B6-201ENST00000233468 LRRC37A2A6NM11 1700 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 GRXCR1A8MXD5 290 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 ADAMTS3O15072 1205 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 TBX3O15119 743 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 F2P00734 622 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 TIMP1P01033 207 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 ACRP10323 421 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 GNAT1P11488 350 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 PDIA4P13667 645 aaKnown RBP12.75□□□□□ -0.37
SF3B6-201ENST00000233468 FOSL2P15408 326 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 TRAPPC10P48553 1259 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 GUCY1B3Q02153 619 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 MUC3AQ02505 3323 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 NR5A1Q13285 461 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 ORC2Q13416 577 aaPredicted RBP12.75□□□□□ -0.37
SF3B6-201ENST00000233468 MFSD10Q14728 455 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 FAM47CQ5HY64 1035 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 LARP1BQ659C4 914 aaKnown RBP12.75□□□□□ -0.37
SF3B6-201ENST00000233468 ZNF746Q6NUN9 644 aaPredicted RBP12.75□□□□□ -0.37
SF3B6-201ENST00000233468 MIS18BP1Q6P0N0 1132 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 GLG1Q92896 1179 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 TEKT3Q9BXF9 490 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 SMARCAD1Q9H4L7 1026 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 TBX21Q9UL17 535 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
SF3B6-201ENST00000233468 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 H3BRB1 525 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 MSH4O15457 936 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 GAS7O60861 476 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 DTNBO60941 627 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 LGALS2P05162 132 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 CSF2RAP15509 400 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 DNAJB2P25686 324 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 SFNP31947 248 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 TCF7P36402 384 aaPredicted RBP12.74□□□□□ -0.37
SF3B6-201ENST00000233468 PBX2P40425 430 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 PSEN2P49810 448 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 SLC26A2P50443 739 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 CHMP4BP1P59074 171 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 ACTR2P61160 394 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 PSMC6P62333 389 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 ITGB3BPQ13352 177 aaPredicted RBP12.74□□□□□ -0.37
SF3B6-201ENST00000233468 KIAA0753Q2KHM9 967 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 TMEM240Q5SV17 173 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 UTP14CQ5TAP6 766 aaKnown RBP12.74□□□□□ -0.37
SF3B6-201ENST00000233468 LRCH2Q5VUJ6 765 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 FAM160B1Q5W0V3 765 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 SESTD1Q86VW0 696 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 NOSTRINQ8IVI9 506 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 SLFN12Q8IYM2 578 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 MBOAT7Q96N66 472 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 TUT1Q9H6E5 874 aaKnown RBP12.74□□□□□ -0.37
SF3B6-201ENST00000233468 ERAP1Q9NZ08 941 aa12.74□□□□□ -0.37
SF3B6-201ENST00000233468 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.73□□□□□ -0.37
SF3B6-201ENST00000233468 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.73□□□□□ -0.37
SF3B6-201ENST00000233468 WDR64B1ANS9 1081 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 BACH1O14867 736 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 TDP2O95551 362 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 PSAPP07602 524 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 ZNF286BP0CG31 522 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 JAK3P52333 1124 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 MCTP1Q6DN14 999 aa12.73□□□□□ -0.37
SF3B6-201ENST00000233468 MFSD5Q6N075 450 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms