RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 SPIRE1Q08AE8 756 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 UGCGQ16739 394 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 RUFY4Q6ZNE9 571 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 PLPPR4Q7Z2D5 763 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 TDHQ8IZJ6 230 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 C7orf31Q8N865 590 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 AFAP1L1Q8TED9 768 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 UNC45AQ9H3U1 944 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 VAV3Q9UKW4 847 aa15.57■□□□□ 0.08
VEGFA-201ENST00000230480 MAFBQ9Y5Q3 323 aaPredicted RBP15.57■□□□□ 0.08
VEGFA-201ENST00000230480 NBNO60934 754 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 INSRRP14616 1297 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 MARK3P27448 753 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 TOB1P50616 345 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-201ENST00000230480 SETQ01105 290 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-201ENST00000230480 FPGSQ05932 587 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 PTK7Q13308 1070 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 LETM2Q2VYF4 491 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 FAM109BQ6ICB4 259 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-201ENST00000230480 NEK8Q86SG6 692 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 TRAPPC12Q8WVT3 735 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 LRCH3Q96II8 777 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 CEP89Q96ST8 783 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 RIT2Q99578 217 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 SDF4Q9BRK5 362 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 KATNAL1Q9BW62 490 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 SMARCAD1Q9H4L7 1026 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 TBC1D22BQ9NU19 505 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 CXXC1Q9P0U4 656 aaPredicted RBP15.56■□□□□ 0.08
VEGFA-201ENST00000230480 PRKAG2Q9UGJ0 569 aa15.56■□□□□ 0.08
VEGFA-201ENST00000230480 MYO9BQ13459 2157 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 GBF1Q92538 1859 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 ST18O60284 1047 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 CKBP12277 381 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 STAT5BP51692 787 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 MKRN4PQ13434 485 aaPredicted RBP15.55■□□□□ 0.08
VEGFA-201ENST00000230480 LRIT3Q3SXY7 679 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 ZNF618Q5T7W0 954 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 ZNF746Q6NUN9 644 aaPredicted RBP15.55■□□□□ 0.08
VEGFA-201ENST00000230480 SWSAP1Q6NVH7 229 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 ZNF365Q70YC5 407 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 C4orf32Q8N8J7 132 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 MTMR9Q96QG7 549 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 LBHD1Q9BQE6 289 aaPredicted RBP15.55■□□□□ 0.08
VEGFA-201ENST00000230480 TMEM60Q9H2L4 133 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 UPF2Q9HAU5 1272 aaKnown RBP15.55■□□□□ 0.08
VEGFA-201ENST00000230480 IL23AQ9NPF7 189 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 DDX25Q9UHL0 483 aaKnown RBP15.55■□□□□ 0.08
VEGFA-201ENST00000230480 CHD9Q3L8U1 2897 aa15.55■□□□□ 0.08
VEGFA-201ENST00000230480 IGSF9BQ9UPX0 1349 aa15.54■□□□□ 0.08
VEGFA-201ENST00000230480 CCDC194A0A1B0GVG4 234 aa15.54■□□□□ 0.08
VEGFA-201ENST00000230480 C17orf102A2RUQ5 167 aa15.54■□□□□ 0.08
VEGFA-201ENST00000230480 U2AF2P26368 475 aaKnown RBP eCLIP15.54■□□□□ 0.082e-48■□□□□ 11.2
VEGFA-201ENST00000230480 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
VEGFA-201ENST00000230480 IL27Q8NEV9 243 aa15.54■□□□□ 0.08
VEGFA-201ENST00000230480 C8orf76Q96K31 380 aa15.54■□□□□ 0.08
VEGFA-201ENST00000230480 ERAP1Q9NZ08 941 aa15.54■□□□□ 0.08
VEGFA-201ENST00000230480 WRAP73Q9P2S5 460 aaPredicted RBP15.54■□□□□ 0.08
VEGFA-201ENST00000230480 NRCAMQ92823 1304 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 CXCL10P02778 98 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 XBP1P17861 261 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 GJB2P29033 226 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 MGAT3Q09327 533 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 GRIK4Q16099 956 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 LRCH2Q5VUJ6 765 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 GLG1Q92896 1179 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 ATP6V0A1Q93050 837 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 DISC1Q9NRI5 854 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 PCDHA10Q9Y5I2 948 aa15.53■□□□□ 0.08
VEGFA-201ENST00000230480 CCNT1O60563 726 aaKnown RBP15.52■□□□□ 0.08
VEGFA-201ENST00000230480 CHRNA1P02708 482 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 SELPP16109 830 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 MCM2P49736 904 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 KRT76Q01546 638 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 PPFIA1Q13136 1202 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 NBR1Q14596 966 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 FAM26DQ5JW98 314 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 RPAINQ86UA6 219 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 TMEM199Q8N511 208 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 LINC01465Q8N7H1 131 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 CAGE1Q8TC20 777 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 ATP8B4Q8TF62 1192 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 HERVK_113Q902F9 699 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 FOXP1Q9H334 677 aaPredicted RBP15.52■□□□□ 0.08
VEGFA-201ENST00000230480 ZNF302Q9NR11 478 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 GABBR1Q9UBS5 961 aa15.52■□□□□ 0.08
VEGFA-201ENST00000230480 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 POTEB3A0JP26 581 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 TMEM150BA6NC51 233 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 GRXCR1A8MXD5 290 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 TBX3O15119 743 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 GCFC2P16383 781 aaKnown RBP15.51■□□□□ 0.07
VEGFA-201ENST00000230480 PPP2R5CQ13362 524 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 PPIGQ13427 754 aaKnown RBP eCLIP15.51■□□□□ 0.071e-7■■□□□ 12.8
VEGFA-201ENST00000230480 TARBP2Q15633 366 aaKnown RBP15.51■□□□□ 0.07
VEGFA-201ENST00000230480 POTEBQ6S5H4 581 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 LRRC8DQ7L1W4 858 aa15.51■□□□□ 0.07
VEGFA-201ENST00000230480 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms