RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 KLC1Q07866 573 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 GRAMD1AQ96CP6 724 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 STAMBPL1Q96FJ0 436 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 CHP1Q99653 195 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 TUBE1Q9UJT0 475 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 PPP1R12AO14974 1030 aaPredicted RBP14.89□□□□□ -0.03
HCFC2-201ENST00000229330 HAUS5O94927 633 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 MMEL1Q495T6 779 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 SOS2Q07890 1332 aaPredicted RBP14.89□□□□□ -0.03
HCFC2-201ENST00000229330 PHF20L1A8MW92 1017 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 H0YIN7 160 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 DAPK3O43293 454 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 GYG1P46976 350 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 SEC24CP53992 1094 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 DEUP1Q05D60 604 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 CYB5D1Q6P9G0 228 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 SRRM1Q8IYB3 904 aaKnown RBP14.89□□□□□ -0.03
HCFC2-201ENST00000229330 LIMA1Q9UHB6 759 aaKnown RBP14.89□□□□□ -0.03
HCFC2-201ENST00000229330 L1RE1Q9UN81 338 aa14.89□□□□□ -0.03
HCFC2-201ENST00000229330 PSMD14O00487 310 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 GIPC1O14908 333 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 BRAFP15056 766 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 FMR1Q06787 632 aaKnown RBP eCLIP14.88□□□□□ -0.03
HCFC2-201ENST00000229330 MKRN3Q13064 507 aaKnown RBP14.88□□□□□ -0.03
HCFC2-201ENST00000229330 NR1H3Q13133 447 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 LRRC14Q15048 493 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 LRRN2O75325 713 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 BCAMP50895 628 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 BYSLQ13895 437 aaKnown RBP14.88□□□□□ -0.03
HCFC2-201ENST00000229330 USH1GQ495M9 461 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 PPWD1Q96BP3 646 aaKnown RBP14.88□□□□□ -0.03
HCFC2-201ENST00000229330 ZIM3Q96PE6 472 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 MIS12Q9H081 205 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 ARL2BPQ9Y2Y0 163 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 SYNGAP1Q96PV0 1343 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 K7ENM7 598 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 APOEP02649 317 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 RPS6KA2Q15349 733 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 RHOT2Q8IXI1 618 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 TRIM11Q96F44 468 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 EMILIN3Q9NT22 766 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 WDR19Q8NEZ3 1342 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 STAM2O75886 525 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 APBA3O96018 575 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 KRT14P02533 472 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 SPATA21Q7Z572 469 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 POLD4Q9HCU8 107 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 MAD1L1Q9Y6D9 718 aa14.88□□□□□ -0.03
HCFC2-201ENST00000229330 MGEA5O60502 916 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 HNRNPCP07910 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 IL6STP40189 918 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 SLC12A2P55011 1212 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 HOOK2Q96ED9 719 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 TRAIPQ9BWF2 469 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 hCG_2014768A0A024R1R8 64 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 GAS7O60861 476 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 FXR1P51114 621 aaKnown RBP eCLIP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 EFHD1Q9BUP0 239 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 NOD2Q9HC29 1040 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 DKC1O60832 514 aaKnown RBP eCLIP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 MYCNP04198 464 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 AP2B1P63010 937 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 WDR93Q6P2C0 686 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 PACS2Q86VP3 889 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 CDKL2Q92772 493 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 ABCA9Q8IUA7 1624 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 MADDQ8WXG6 1647 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 MIF4GDA9UHW6 222 aaKnown RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 SLC8A3P57103 927 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 ATG16L1Q676U5 607 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 GRAMD4Q6IC98 578 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 TTBK2Q6IQ55 1244 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 SERPINI1Q99574 410 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 RFX7Q2KHR2 1363 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 GOLGA8QA0A0J9YX86 632 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 GOLGA8OA6NCC3 632 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 FAM187AA6NFU0 413 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 GOLGA8NF8WBI6 632 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 PDE8BO95263 885 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 GARSP41250 739 aaKnown RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 KRT81Q14533 505 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 AGBL2Q5U5Z8 902 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 C1orf146Q5VVC0 180 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 CNPY4Q8N129 248 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 XPO6Q96QU8 1125 aaKnown RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 PRMT1Q99873 361 aaKnown RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 NDE1Q9NXR1 346 aa14.87□□□□□ -0.03
HCFC2-201ENST00000229330 ADD3Q9UEY8 706 aaKnown RBP14.87□□□□□ -0.03
HCFC2-201ENST00000229330 TTC4O95801 387 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 SUGP1Q8IWZ8 645 aaKnown RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 PPARGC1AQ9UBK2 798 aaKnown RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 NOC2LQ9Y3T9 749 aaKnown RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 SLC4A7Q9Y6M7 1214 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 CCT8L1PA6NM43 557 aa14.86□□□□□ -0.03
HCFC2-201ENST00000229330 MRPS9P82933 396 aaKnown RBP14.86□□□□□ -0.03
HCFC2-201ENST00000229330 PTK2Q05397 1052 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms