RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ERGIC2Q96RQ1 377 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 ISCUQ9H1K1 167 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 PEAK1Q9H792 1746 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 CNOT10Q9H9A5 744 aaKnown RBP15.8■□□□□ 0.12
PRDM4-201ENST00000228437 LGR5O75473 907 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 PLCG2P16885 1265 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 CCNHP51946 323 aaPredicted RBP15.8■□□□□ 0.12
PRDM4-201ENST00000228437 KCNH2Q12809 1159 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 SLC29A2Q14542 456 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 UAP1Q16222 522 aaPredicted RBP15.8■□□□□ 0.12
PRDM4-201ENST00000228437 UBE2SQ16763 222 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 HP1BP3Q5SSJ5 553 aaPredicted RBP15.8■□□□□ 0.12
PRDM4-201ENST00000228437 ARMC9Q7Z3E5 817 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 PBKQ96KB5 322 aa15.8■□□□□ 0.12
PRDM4-201ENST00000228437 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.8■□□□□ 0.12
PRDM4-201ENST00000228437 WDR91A4D1P6 747 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 E9PMD0 336 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 CYP2J2P51589 502 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 DRP2Q13474 957 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 LRRC47Q8N1G4 583 aaKnown RBP15.79■□□□□ 0.12
PRDM4-201ENST00000228437 ADAMTS13Q76LX8 1427 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 ITSN1Q15811 1721 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 WTIPA6NIX2 430 aaPredicted RBP15.79■□□□□ 0.12
PRDM4-201ENST00000228437 KRT15P19012 456 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 ELF3P78545 371 aaPredicted RBP15.79■□□□□ 0.12
PRDM4-201ENST00000228437 SLC18A3Q16572 532 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 LONRF1Q17RB8 773 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 SYCE1Q8N0S2 351 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 CEP72Q9P209 647 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 PCDHA12Q9UN75 941 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 THRAP3Q9Y2W1 955 aaKnown RBP15.79■□□□□ 0.12
PRDM4-201ENST00000228437 CNTNAP5Q8WYK1 1306 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 TDP2O95551 362 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 EPB41P11171 864 aaKnown RBP15.79■□□□□ 0.12
PRDM4-201ENST00000228437 FNTAP49354 379 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 RAD23BP54727 409 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 IFI35P80217 286 aaPredicted RBP15.79■□□□□ 0.12
PRDM4-201ENST00000228437 SPRED3Q2MJR0 410 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 TSNAXIP1Q2TAA8 658 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 GJB7Q6PEY0 223 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 ABCF3Q9NUQ8 709 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 HDAC9Q9UKV0 1011 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 MYH10P35580 1976 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 TRAPPC3O43617 180 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 PRDX5P30044 214 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 KCNJ2P63252 427 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 PTK2Q05397 1052 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 AGAP11Q8TF27 550 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 PCDHA6Q9UN73 950 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 PCDHA8Q9Y5H6 950 aa15.79■□□□□ 0.12
PRDM4-201ENST00000228437 GLYCTKQ8IVS8 523 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 IQCDQ96DY2 449 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 MTUS1Q9ULD2 1270 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 USH1CQ9Y6N9 552 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 POC1B-GALNT4F8VUJ3 575 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 KCNJ1P48048 391 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 NAALADL2Q58DX5 795 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 THEMIS2Q5TEJ8 643 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 SRRM1Q8IYB3 904 aaKnown RBP15.78■□□□□ 0.12
PRDM4-201ENST00000228437 EPS8L3Q8TE67 593 aaKnown RBP15.78■□□□□ 0.12
PRDM4-201ENST00000228437 BRD2P25440 801 aaKnown RBP15.78■□□□□ 0.12
PRDM4-201ENST00000228437 MSH2P43246 934 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 TNIP1Q15025 636 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 NAB2Q15742 525 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 ZSCAN29Q8IWY8 852 aaPredicted RBP15.78■□□□□ 0.12
PRDM4-201ENST00000228437 KIAA0895Q8NCT3 520 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 NAP1L3Q99457 506 aaPredicted RBP15.78■□□□□ 0.12
PRDM4-201ENST00000228437 EMILIN3Q9NT22 766 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 MYH8P13535 1937 aa15.78■□□□□ 0.12
PRDM4-201ENST00000228437 GRID2IPA4D2P6 1211 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 THAP12O43422 761 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 EEF2P13639 858 aaKnown RBP15.77■□□□□ 0.12
PRDM4-201ENST00000228437 UNC13DQ70J99 1090 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 TRIM4Q9C037 500 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 GDF3Q9NR23 364 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 TRPC6Q9Y210 931 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 PDE6CP51160 858 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 PLCB3Q01970 1234 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 ZNF746Q6NUN9 644 aaPredicted RBP15.77■□□□□ 0.12
PRDM4-201ENST00000228437 SPICE1Q8N0Z3 855 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 TRIM33Q9UPN9 1127 aa15.77■□□□□ 0.12
PRDM4-201ENST00000228437 XRN1Q8IZH2 1706 aaKnown RBP15.77■□□□□ 0.12
PRDM4-201ENST00000228437 IRX1P78414 480 aaPredicted RBP15.77■□□□□ 0.11
PRDM4-201ENST00000228437 SEC23AQ15436 765 aa15.77■□□□□ 0.11
PRDM4-201ENST00000228437 DIXDC1Q155Q3 683 aa15.77■□□□□ 0.11
PRDM4-201ENST00000228437 RASIP1Q5U651 963 aa15.77■□□□□ 0.11
PRDM4-201ENST00000228437 CCDC77Q9BR77 488 aa15.77■□□□□ 0.11
PRDM4-201ENST00000228437 GCNT4Q9P109 453 aa15.77■□□□□ 0.11
PRDM4-201ENST00000228437 G3BP2Q9UN86 482 aaKnown RBP15.77■□□□□ 0.11
PRDM4-201ENST00000228437 PREX1Q8TCU6 1659 aa15.77■□□□□ 0.11
PRDM4-201ENST00000228437 A8MUI8 341 aa15.76■□□□□ 0.11
PRDM4-201ENST00000228437 ADAMTS2O95450 1211 aa15.76■□□□□ 0.11
PRDM4-201ENST00000228437 ALDH3A1P30838 453 aa15.76■□□□□ 0.11
PRDM4-201ENST00000228437 PARD3BQ8TEW8 1205 aa15.76■□□□□ 0.11
PRDM4-201ENST00000228437 TCEAL9Q9UHQ7 104 aa15.76■□□□□ 0.11
PRDM4-201ENST00000228437 BAG3O95817 575 aa15.76■□□□□ 0.11
PRDM4-201ENST00000228437 SHBGP04278 402 aa15.76■□□□□ 0.11
PRDM4-201ENST00000228437 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
PRDM4-201ENST00000228437 DDR1Q08345 913 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms