RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 SLC38A10Q9HBR0 1119 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 WRAP73Q9P2S5 460 aaPredicted RBP21.15■□□□□ 0.98
YBX3-201ENST00000228251 FAM184BQ9ULE4 1060 aa21.15■□□□□ 0.98
YBX3-201ENST00000228251 COL11A1P12107 1806 aaPredicted RBP21.14■□□□□ 0.98
YBX3-201ENST00000228251 FZD9O00144 591 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 NFIBO00712 420 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 GAS7O60861 476 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 PLEKP08567 350 aaPredicted RBP21.14■□□□□ 0.97
YBX3-201ENST00000228251 MYBP10242 640 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 GAP43P17677 238 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 ITGB5P18084 799 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 ADAM9Q13443 819 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 EPHA7Q15375 998 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 DPY19L2P1Q6NXN4 242 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 SRGAP1Q7Z6B7 1085 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 SMCR8Q8TEV9 937 aaPredicted RBP21.14■□□□□ 0.97
YBX3-201ENST00000228251 RIT2Q99578 217 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 SGIP1Q9BQI5 828 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 LACRTQ9GZZ8 138 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 ASTN1O14525 1302 aa21.14■□□□□ 0.97
YBX3-201ENST00000228251 GMPSP49915 693 aaPredicted RBP21.13■□□□□ 0.97
YBX3-201ENST00000228251 ZNF131P52739 623 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 ASTE1Q2TB18 679 aaPredicted RBP21.13■□□□□ 0.97
YBX3-201ENST00000228251 PIGOQ8TEQ8 1089 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 HOOK2Q96ED9 719 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 FIZ1Q96SL8 496 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 ZNF577Q9BSK1 485 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 CEP72Q9P209 647 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 TFR2Q9UP52 801 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 ZMYM2Q9UBW7 1377 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 LRRC53A6NM62 1247 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 CETN3O15182 167 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 ERCC3P19447 782 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 DGKZQ13574 1117 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 HGSNATQ68CP4 663 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 KRT26Q7Z3Y9 468 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 MICALL2Q8IY33 904 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 NEK11Q8NG66 645 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 IL31RAQ8NI17 732 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 RABGGTAQ92696 567 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 SYN2Q92777 582 aaPredicted RBP21.13■□□□□ 0.97
YBX3-201ENST00000228251 ZHX3Q9H4I2 956 aa21.13■□□□□ 0.97
YBX3-201ENST00000228251 IPO5O00410 1097 aaKnown RBP21.12■□□□□ 0.97
YBX3-201ENST00000228251 ZBTB39O15060 712 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 EIF3DO15371 548 aaKnown RBP eCLIP21.12■□□□□ 0.97
YBX3-201ENST00000228251 DHX15O43143 795 aaKnown RBP21.12■□□□□ 0.97
YBX3-201ENST00000228251 PRPF6O94906 941 aaKnown RBP21.12■□□□□ 0.97
YBX3-201ENST00000228251 NR2F2P24468 414 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 CLCN6P51797 869 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 VAV2P52735 878 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 MAPK8IP2Q13387 824 aaPredicted RBP21.12■□□□□ 0.97
YBX3-201ENST00000228251 SAMD7Q7Z3H4 446 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 FRMD5Q7Z6J6 570 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 SAMD3Q8N6K7 520 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 GPR161Q8N6U8 529 aaKnown RBP21.12■□□□□ 0.97
YBX3-201ENST00000228251 JAKMIP2Q96AA8 810 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 TYW1Q9NV66 732 aaKnown RBP21.12■□□□□ 0.97
YBX3-201ENST00000228251 GUCA1BQ9UMX6 200 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.12■□□□□ 0.97
YBX3-201ENST00000228251 UBIAD1Q9Y5Z9 338 aa21.12■□□□□ 0.97
YBX3-201ENST00000228251 WDR81Q562E7 1941 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 ZSCAN20P17040 1043 aaPredicted RBP21.11■□□□□ 0.97
YBX3-201ENST00000228251 NFIL3Q16649 462 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 CCDC122Q5T0U0 273 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 TPH2Q8IWU9 490 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 ZFP91Q96JP5 570 aaPredicted RBP21.11■□□□□ 0.97
YBX3-201ENST00000228251 TEKT3Q9BXF9 490 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 MAP3K20Q9NYL2 800 aaKnown RBP21.11■□□□□ 0.97
YBX3-201ENST00000228251 HACL1Q9UJ83 578 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 ZNF112Q9UJU3 913 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 PPP1R9AQ9ULJ8 1098 aa21.11■□□□□ 0.97
YBX3-201ENST00000228251 CHMP2AO43633 222 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 TBCAO75347 108 aaKnown RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 VCAM1P19320 739 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 WHAMMP3Q1A5X7 153 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 RRAGAQ7L523 313 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 TRAPPC11Q7Z392 1133 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 MCF2L2Q86YR7 1114 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 CEP112Q8N8E3 955 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 NEK9Q8TD19 979 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 SYTL5Q8TDW5 730 aaPredicted RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 NACC1Q96RE7 527 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 TANGO6Q9C0B7 1094 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 GANQ9H2C0 597 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 KCND2Q9NZV8 630 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 LOC285556D6RIA3 1793 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 SSU72P8A0A1W2PR75 194 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 TGFB1I1O43294 461 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 KRT86O43790 486 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 TLR2O60603 784 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 ZRANB2O95218 330 aaKnown RBP eCLIP21.1■□□□□ 0.97
YBX3-201ENST00000228251 EIF4A3P38919 411 aaKnown RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 KIF11P52732 1056 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 MRPS9P82933 396 aaKnown RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 CYP27A1Q02318 531 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 MUM1L1Q5H9M0 696 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 NBPF12Q5TAG4 269 aaPredicted RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 PAPD7Q5XG87 772 aaKnown RBP21.1■□□□□ 0.97
YBX3-201ENST00000228251 PCNX4Q63HM2 1172 aa21.1■□□□□ 0.97
YBX3-201ENST00000228251 KIAA1328Q86T90 577 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms