RNA–Protein interactions for RNA: ENST00000224949.8

PITRM1-201, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PITRM1, Length 3,450 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-201ENST00000224949 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-201ENST00000224949 UTP11Q9Y3A2 253 aaKnown RBP13.81□□□□□ -0.2
PITRM1-201ENST00000224949 SLIT2O94813 1529 aa13.81□□□□□ -0.2
PITRM1-201ENST00000224949 USP17L5A8MUK1 530 aa13.81□□□□□ -0.2
PITRM1-201ENST00000224949 VIMP08670 466 aaKnown RBP13.81□□□□□ -0.2
PITRM1-201ENST00000224949 NR2F2P24468 414 aa13.81□□□□□ -0.2
PITRM1-201ENST00000224949 CUL1Q13616 776 aa13.81□□□□□ -0.2
PITRM1-201ENST00000224949 GPBP1Q86WP2 473 aa13.81□□□□□ -0.2
PITRM1-201ENST00000224949 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
PITRM1-201ENST00000224949 ZNF142P52746 1687 aaPredicted RBP13.81□□□□□ -0.2
PITRM1-201ENST00000224949 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
PITRM1-201ENST00000224949 FGGP02679 453 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 KRT13P13646 458 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 GJB7Q6PEY0 223 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 ADCY7P51828 1080 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 ZNF211Q13398 564 aaPredicted RBP13.8□□□□□ -0.2
PITRM1-201ENST00000224949 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 CCDC26Q8TAB7 109 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 PSMD1Q99460 953 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 SLC12A6Q9UHW9 1150 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 CD2APQ9Y5K6 639 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 USP11P51784 963 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 SEMA3FQ13275 785 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 TBC1D1Q86TI0 1168 aaPredicted RBP13.8□□□□□ -0.2
PITRM1-201ENST00000224949 SLC24A3Q9HC58 644 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 HDAC9Q9UKV0 1011 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 ZNF652Q9Y2D9 606 aa13.8□□□□□ -0.2
PITRM1-201ENST00000224949 CASZ1Q86V15 1759 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 ATXN2Q99700 1313 aaKnown RBP13.79□□□□□ -0.2
PITRM1-201ENST00000224949 SPDYE3A6NKU9 549 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 CETN3O15182 167 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 ECHS1P30084 290 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 PLTPP55058 493 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 RPS8P62241 208 aaKnown RBP13.79□□□□□ -0.2
PITRM1-201ENST00000224949 MKRN4PQ13434 485 aaPredicted RBP13.79□□□□□ -0.2
PITRM1-201ENST00000224949 BIRC3Q13489 604 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 C6orf89Q6UWU4 347 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 TEX2Q8IWB9 1127 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.79□□□□□ -0.27e-8■□□□□ 11
PITRM1-201ENST00000224949 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 TAF1P21675 1872 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 POTEB3A0JP26 581 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 POTECB2RU33 542 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 BUB1BO60566 1050 aaPredicted RBP13.79□□□□□ -0.2
PITRM1-201ENST00000224949 CAND2O75155 1236 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 NEBLO76041 1014 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 RASA1P20936 1047 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 MTMR3Q13615 1198 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 IFI16Q16666 785 aaKnown RBP13.79□□□□□ -0.2
PITRM1-201ENST00000224949 PREPLQ4J6C6 727 aaPredicted RBP13.79□□□□□ -0.2
PITRM1-201ENST00000224949 POTEBQ6S5H4 581 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 LRIG3Q6UXM1 1119 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 CCDC65Q8IXS2 484 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 CEP95Q96GE4 821 aa13.79□□□□□ -0.2
PITRM1-201ENST00000224949 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 SKAP2O75563 359 aaPredicted RBP13.78□□□□□ -0.2
PITRM1-201ENST00000224949 MMEP08473 750 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 HSPA2P54652 639 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 SIK1P57059 783 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 GRIK5Q16478 980 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 FBXO33Q7Z6M2 555 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
PITRM1-201ENST00000224949 PBKQ96KB5 322 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 FMO2Q99518 471 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 ELAC2Q9BQ52 826 aaKnown RBP13.78□□□□□ -0.2
PITRM1-201ENST00000224949 DONSONQ9NYP3 566 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 PCDHA12Q9UN75 941 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 BCL9O00512 1426 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 TMEM110-MUSTN1A8MSY1 372 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 MEIS1O00470 390 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 GFPT2O94808 682 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 PDE6BP35913 854 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 ITPK1Q13572 414 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 EXOC3L4Q17RC7 722 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 CCDC25Q86WR0 208 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 EDEM3Q9BZQ6 932 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 DDX25Q9UHL0 483 aaKnown RBP13.78□□□□□ -0.2
PITRM1-201ENST00000224949 MCM8Q9UJA3 840 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 NAGPAQ9UK23 515 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 H0YGN5 161 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 CLIC2O15247 247 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 FLOT1O75955 427 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 BAG3O95817 575 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 H2AFZP0C0S5 128 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 CHN1P15882 459 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 CCDC38Q502W7 563 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 H2AFVQ71UI9 128 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 TMC3Q7Z5M5 1100 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 VPS36Q86VN1 386 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 CCDC197Q8NCU1 140 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 GLG1Q92896 1179 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 CHMP6Q96FZ7 201 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 LRRC27Q9C0I9 530 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
PITRM1-201ENST00000224949 SNX24Q9Y343 169 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms