RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CCT6AP40227 531 aaKnown RBP15.74■□□□□ 0.11
SEC61B-201ENST00000223641 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
SEC61B-201ENST00000223641 KLHL40Q2TBA0 621 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 SKOR2Q2VWA4 1001 aaPredicted RBP15.74■□□□□ 0.11
SEC61B-201ENST00000223641 MIS18BP1Q6P0N0 1132 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 POTEBQ6S5H4 581 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 CCDC60Q8IWA6 550 aaPredicted RBP15.74■□□□□ 0.11
SEC61B-201ENST00000223641 OR6J1Q8NGC5 347 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 AFAP1L1Q8TED9 768 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 SPATA33Q96N06 139 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 PCYT2Q99447 389 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 DACT1Q9NYF0 836 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 WRAP73Q9P2S5 460 aaPredicted RBP15.74■□□□□ 0.11
SEC61B-201ENST00000223641 USP25Q9UHP3 1055 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 SAMM50Q9Y512 469 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 MAFBQ9Y5Q3 323 aaPredicted RBP15.74■□□□□ 0.11
SEC61B-201ENST00000223641 LOXHD1Q8IVV2 1947 aa15.74■□□□□ 0.11
SEC61B-201ENST00000223641 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 IGSF9BQ9UPX0 1349 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 CTAGE5O15320 804 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 ACTN4O43707 911 aaKnown RBP15.73■□□□□ 0.11
SEC61B-201ENST00000223641 SORBS3O60504 671 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 PLCG1P19174 1290 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 GJA9P57773 515 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 CYP4A11Q02928 519 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 PKN2Q16513 984 aaKnown RBP15.73■□□□□ 0.11
SEC61B-201ENST00000223641 LONRF3Q496Y0 759 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 TPRNQ4KMQ1 711 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 RRAGBQ5VZM2 374 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 TLK2Q86UE8 772 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 C4orf19Q8IY42 314 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 ELOA2Q8IYF1 753 aaPredicted RBP15.73■□□□□ 0.11
SEC61B-201ENST00000223641 PDILTQ8N807 584 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 IQUBQ8NA54 791 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 AFG1LQ8WV93 481 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 LXNQ9BS40 222 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 PANK2Q9BZ23 570 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
SEC61B-201ENST00000223641 CUEDC2Q9H467 287 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 BLOC1S4Q9NUP1 217 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 KIAA1024Q9UPX6 916 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 FRMPD3Q5JV73 1810 aa15.73■□□□□ 0.11
SEC61B-201ENST00000223641 NOP56O00567 594 aaKnown RBP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 DYNC1LI2O43237 492 aaPredicted RBP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 ZNF862O60290 1169 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 DKC1O60832 514 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 STBD1O95210 358 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 MMP3P08254 477 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 SLFN14P0C7P3 912 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 XRCC6P12956 609 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 ATP4AP20648 1035 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 PSMC5P62195 406 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 SP4Q02446 784 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 CTTNQ14247 550 aaKnown RBP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 UGCGQ16739 394 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 PDXDC2PQ6P474 469 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 FBXO46Q6PJ61 603 aaPredicted RBP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 POTEGQ6S5H5 508 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 PLPPR4Q7Z2D5 763 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 KCNK18Q7Z418 384 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 BANK1Q8NDB2 785 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 LENG1Q96BZ8 264 aaPredicted RBP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 HMX1Q9NP08 348 aaPredicted RBP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 DDX19AQ9NUU7 478 aaKnown RBP15.72■□□□□ 0.11
SEC61B-201ENST00000223641 GABBR1Q9UBS5 961 aa15.72■□□□□ 0.11
SEC61B-201ENST00000223641 TRAK2O60296 914 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 MSCO60682 206 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 ADAMTS4O75173 837 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 RARBP10826 455 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 CNGA1P29973 690 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 STAT6P42226 847 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 PSMC6P62333 389 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 LHX8Q68G74 356 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 KRBA2Q6ZNG9 492 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 SH3RF1Q7Z6J0 888 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 TPH2Q8IWU9 490 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 SH3TC2Q8TF17 1288 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 ATP6V0A1Q93050 837 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 DHX58Q96C10 678 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 CDK5RAP3Q96JB5 506 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 NACC1Q96RE7 527 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 AP5M1Q9H0R1 490 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 PRDM10Q9NQV6 1147 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 ZNF302Q9NR11 478 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 KBTBD4Q9NVX7 518 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 DDX20Q9UHI6 824 aaKnown RBP15.71■□□□□ 0.11
SEC61B-201ENST00000223641 SERTAD1Q9UHV2 236 aa15.71■□□□□ 0.11
SEC61B-201ENST00000223641 SYNRGQ9UMZ2 1314 aa15.7■□□□□ 0.1
SEC61B-201ENST00000223641 E9PMD0 336 aa15.7■□□□□ 0.1
SEC61B-201ENST00000223641 KINO60870 393 aaKnown RBP15.7■□□□□ 0.1
SEC61B-201ENST00000223641 LGALS2P05162 132 aa15.7■□□□□ 0.1
SEC61B-201ENST00000223641 CPT1AP50416 773 aa15.7■□□□□ 0.1
SEC61B-201ENST00000223641 SLC26A2P50443 739 aa15.7■□□□□ 0.1
SEC61B-201ENST00000223641 STAT5BP51692 787 aa15.7■□□□□ 0.1
SEC61B-201ENST00000223641 MDM2Q00987 491 aaPredicted RBP15.7■□□□□ 0.1
SEC61B-201ENST00000223641 DGKDQ16760 1214 aa15.7■□□□□ 0.1
SEC61B-201ENST00000223641 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms