RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 CTNND1O60716 968 aaKnown RBP19.27■□□□□ 0.67
EXTL3-201ENST00000220562 MARK3P27448 753 aa19.27■□□□□ 0.67
EXTL3-201ENST00000220562 CPSF3Q9UKF6 684 aaKnown RBP19.27■□□□□ 0.67
EXTL3-201ENST00000220562 NOVA2Q9UNW9 492 aaKnown RBP19.27■□□□□ 0.67
EXTL3-201ENST00000220562 LRRC4Q9HBW1 653 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 ATP8B3O60423 1300 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 SLMAPQ14BN4 828 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 SIX6OS1Q8N1H7 587 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 PARD3BQ8TEW8 1205 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 PPWD1Q96BP3 646 aaKnown RBP19.26■□□□□ 0.67
EXTL3-201ENST00000220562 RNF14Q9UBS8 474 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 FNDC3AQ9Y2H6 1198 aaKnown RBP19.26■□□□□ 0.67
EXTL3-201ENST00000220562 HEG1Q9ULI3 1381 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 SRGAP2CP0DJJ0 459 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 INPP1P49441 399 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 RASGRF1Q13972 1273 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 TCP11Q8WWU5 503 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 SFI1A8K8P3 1242 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 KRT31Q15323 416 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 RASIP1Q5U651 963 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 ZNF710Q8N1W2 664 aa19.26■□□□□ 0.67
EXTL3-201ENST00000220562 RPF1Q9H9Y2 349 aaKnown RBP19.26■□□□□ 0.67
EXTL3-201ENST00000220562 FAF1Q9UNN5 650 aaPredicted RBP19.26■□□□□ 0.67
EXTL3-201ENST00000220562 NOC2LQ9Y3T9 749 aaKnown RBP19.26■□□□□ 0.67
EXTL3-201ENST00000220562 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 PLEKHG1Q9ULL1 1385 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 EXOC1LA0A1B0GW35 172 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 NVLO15381 856 aaKnown RBP19.25■□□□□ 0.67
EXTL3-201ENST00000220562 CYP27A1Q02318 531 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 SUPT20HL1Q3ZLR7 823 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 MSTO1Q9BUK6 570 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 CNOT10Q9H9A5 744 aaKnown RBP19.25■□□□□ 0.67
EXTL3-201ENST00000220562 USP6P35125 1406 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 PHEXP78562 749 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 FAM182BQ5T319 152 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 RESP18Q5W5W9 173 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 ZMYND12Q9H0C1 365 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 TTC37Q6PGP7 1564 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 SPOPLQ6IQ16 392 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 TMEM94Q12767 1356 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 TRIM4Q9C037 500 aa19.25■□□□□ 0.67
EXTL3-201ENST00000220562 ERVV-1B6SEH8 477 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 HSPA6P17066 643 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 LRRC63Q05C16 580 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 CDO1Q16878 200 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 SASH1O94885 1247 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 HP1BP3Q5SSJ5 553 aaPredicted RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 RNF207Q6ZRF8 634 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 PDCD7Q8N8D1 485 aaKnown RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 CXorf38Q8TB03 319 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 SH3GLB2Q9NR46 395 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 ABCF3Q9NUQ8 709 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 DNAJC17Q9NVM6 304 aaKnown RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 SPDYE2BA6NHP3 402 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 RASGRF2O14827 1237 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 SPDYE6P0CI01 402 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 EIF2AK2P19525 551 aaKnown RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 SH3RF3Q8TEJ3 882 aaPredicted RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 ORC6Q9Y5N6 252 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 NCF2P19878 526 aaPredicted RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 SH3BGRP55822 239 aaPredicted RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 E2F5Q15329 346 aa19.24■□□□□ 0.67
EXTL3-201ENST00000220562 G3BP2Q9UN86 482 aaKnown RBP19.24■□□□□ 0.67
EXTL3-201ENST00000220562 SUSD4Q5VX71 490 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 PDXDC2PQ6P474 469 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 GINM1Q9NU53 330 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
EXTL3-201ENST00000220562 TTI1O43156 1089 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 PEX19P40855 299 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 KIF1BO60333 1816 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 ZNF18P17022 549 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 ANXA13P27216 316 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 KPNA2P52292 529 aaKnown RBP19.23■□□□□ 0.67
EXTL3-201ENST00000220562 MKRN3Q13064 507 aaKnown RBP19.23■□□□□ 0.67
EXTL3-201ENST00000220562 PCGF5Q86SE9 256 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 FAM160B2Q86V87 743 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 NEK9Q8TD19 979 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 WHAMMQ8TF30 809 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 ZNF526Q8TF50 670 aaPredicted RBP19.23■□□□□ 0.67
EXTL3-201ENST00000220562 FMO2Q99518 471 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 TRPC5Q9UL62 973 aaPredicted RBP19.23■□□□□ 0.67
EXTL3-201ENST00000220562 NECTIN1Q15223 517 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 ARMC9Q7Z3E5 817 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 NEO1Q92859 1461 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 CLCN6P51797 869 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 GRAPQ13588 217 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 ALS2CLQ60I27 953 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 GRAPLQ8TC17 118 aaPredicted RBP19.23■□□□□ 0.67
EXTL3-201ENST00000220562 ABCB6Q9NP58 842 aa19.23■□□□□ 0.67
EXTL3-201ENST00000220562 NEDD4P46934 1319 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 MFAP3LO75121 409 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 BBS9Q3SYG4 887 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 EFCAB13Q8IY85 973 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 TXLNGQ9NUQ3 528 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 ATP1A3P13637 1013 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 PEX3P56589 373 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 ALCAMQ13740 583 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 TOGARAM2Q6ZUX3 1019 aa19.22■□□□□ 0.67
EXTL3-201ENST00000220562 NUDCD1Q96RS6 583 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms