RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 EIF3CQ99613 913 aaKnown RBP16.13■□□□□ 0.17
NDFIP2-201ENST00000218652 TMEM206Q9H813 350 aa16.13■□□□□ 0.17
NDFIP2-201ENST00000218652 PPARGC1AQ9UBK2 798 aaKnown RBP16.13■□□□□ 0.17
NDFIP2-201ENST00000218652 TCOF1Q13428 1488 aaKnown RBP16.13■□□□□ 0.17
NDFIP2-201ENST00000218652 PRPF3O43395 683 aaKnown RBP16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 TADA3O75528 432 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 RWDD2BP57060 319 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 ZNF394Q53GI3 561 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 GOLGA8QA0A0J9YX86 632 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 GOLGA8OA6NCC3 632 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 GOLGA8NF8WBI6 632 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 MTERF2Q49AM1 385 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 DRC3Q9H069 523 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 TRIM49BA6NDI0 452 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 CCDC188H7C350 402 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 MAPK13O15264 365 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 BMP3P12645 472 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 FAM160B1Q5W0V3 765 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 BBS5Q8N3I7 341 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 HEMGNQ9BXL5 484 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 PALMO75781 387 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 LRRC63Q05C16 580 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 SRRM1Q8IYB3 904 aaKnown RBP16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 TRIML2Q8N7C3 387 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 LRRC4Q9HBW1 653 aa16.12■□□□□ 0.17
NDFIP2-201ENST00000218652 PRPSAP2O60256 369 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 PLEKHA8P1O95397 391 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 ZBED1O96006 694 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 PTPREP23469 700 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 ADCY2Q08462 1091 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 SCARA5Q6ZMJ2 495 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 CENPUQ71F23 418 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 SYT2Q8N9I0 419 aaPredicted RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 PPP1R12AO14974 1030 aaPredicted RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 MAGEA9P43362 315 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 KCNQ4P56696 695 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 TMPRSS15P98073 1019 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 TMED1Q13445 227 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 CUL1Q13616 776 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 KCTD2Q14681 263 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 PDCD2Q16342 344 aaPredicted RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 ZBTB33Q86T24 672 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 CFAP36Q96G28 342 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 NOP53Q9NZM5 478 aaKnown RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 PRDM4Q9UKN5 801 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 ABCC10Q5T3U5 1492 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 WDR64B1ANS9 1081 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 ZNF18P17022 549 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 THOC5Q13769 683 aaKnown RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 TFDP1Q14186 410 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 CDO1Q16878 200 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 MMS22LQ6ZRQ5 1243 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 CHUKO15111 745 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 NVLO15381 856 aaKnown RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 XPOTO43592 962 aaKnown RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 SRGAP2BP0DMP2 458 aa16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 HOXA13P31271 388 aaPredicted RBP16.11■□□□□ 0.17
NDFIP2-201ENST00000218652 ZRANB2O95218 330 aaKnown RBP eCLIP16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 PLS3P13797 630 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 GGCXP38435 758 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 CRKLP46109 303 aaKnown RBP16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 CTTNQ14247 550 aaKnown RBP16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 CCDC144BQ3MJ40 725 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 PPP6R3Q5H9R7 873 aaPredicted RBP16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 PI4K2BQ8TCG2 481 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 SAYSD1Q9NPB0 183 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 SCINQ9Y6U3 715 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 RASA4BC9J798 803 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 SNAP23O00161 211 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 GYG2O15488 501 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 RASA4O43374 803 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 EP400NLQ6ZTU2 488 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 ZC3H18Q86VM9 953 aaKnown RBP16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 CDC26Q8NHZ8 85 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 TRAIPQ9BWF2 469 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 PACSIN2Q9UNF0 486 aaPredicted RBP16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 XDHP47989 1333 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 S100BP04271 92 aaPredicted RBP16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 PSMD2Q13200 908 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 TUBB6Q9BUF5 446 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 CPVLQ9H3G5 476 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 ORC6Q9Y5N6 252 aa16.1■□□□□ 0.17
NDFIP2-201ENST00000218652 GOLGA8CPA6NN73 597 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 PI4K2BG5E9Z4 385 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 ZBTB24O43167 697 aaPredicted RBP16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 MAGOHP61326 146 aaKnown RBP16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 ACTN3Q08043 901 aaPredicted RBP16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 SARM1Q6SZW1 724 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 PIGOQ8TEQ8 1089 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 SNX25Q9H3E2 840 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 DBNDD1Q9H9R9 158 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 ANAPC7Q9UJX3 599 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 LPXNO60711 386 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 KRT10P13645 584 aa16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 XPAP23025 273 aaPredicted RBP16.09■□□□□ 0.17
NDFIP2-201ENST00000218652 ARL6IP4Q66PJ3 421 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms