RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 TCP11Q8WWU5 503 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 PSMD1Q99460 953 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 CPVLQ9H3G5 476 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 BMP2KQ9NSY1 1161 aaPredicted RBP10.58□□□□□ -0.72
TUBB1-201ENST00000217133 ATP8A2Q9NTI2 1148 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 TBC1D7Q9P0N9 293 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 STK17AQ9UEE5 414 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 SMIM23A6NLE4 172 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 CLTAP09496 248 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 GRM4Q14833 912 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 COBLL1Q53SF7 1204 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 KRT79Q5XKE5 535 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 DGKHQ86XP1 1220 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 KIRREL3Q8IZU9 778 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 ZNF444Q8N0Y2 327 aaPredicted RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 CCDC63Q8NA47 563 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 MDM1Q8TC05 714 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 TBCKQ8TEA7 893 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 SYN2Q92777 582 aaPredicted RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 TATDN2Q93075 761 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 ZNF622Q969S3 477 aaKnown RBP eCLIP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 CHMP6Q96FZ7 201 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 LRRC27Q9C0I9 530 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 SEC63Q9UGP8 760 aaKnown RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 ATP8A1Q9Y2Q0 1164 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 UTP11Q9Y3A2 253 aaKnown RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 NOC2LQ9Y3T9 749 aaKnown RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 BTAF1O14981 1849 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 PAPPAQ13219 1627 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 USP11P51784 963 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 PRPF4BQ13523 1007 aaKnown RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 CALCRLQ16602 461 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 FMNL3Q8IVF7 1028 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 EIF1ADQ8N9N8 165 aaKnown RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 DDX12PQ92771 950 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 ZHX3Q9H4I2 956 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 CNOT10Q9H9A5 744 aaKnown RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 BIN2Q9UBW5 565 aaPredicted RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 DUOX1Q9NRD9 1551 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 CNTNAP4Q9C0A0 1308 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 USP17L3A6NCW0 530 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 USP17L4A6NCW7 530 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 KLRF2D3W0D1 207 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 M0R2N6 131 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 MECOMQ03112 1051 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 GRB10Q13322 594 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 CRYMQ14894 314 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 USP17L1Q7RTZ2 530 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 GLIS3Q8NEA6 775 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 MMTAG2Q9BU76 263 aaKnown RBP10.57□□□□□ -0.72
TUBB1-201ENST00000217133 NEUROG2Q9H2A3 272 aa10.57□□□□□ -0.72
TUBB1-201ENST00000217133 WTIPA6NIX2 430 aaPredicted RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 H0YGN5 161 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 CCDC188H7C350 402 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 PAX7P23759 505 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 FLT3P36888 993 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 MRPL12P52815 198 aaKnown RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 XRCC4Q13426 336 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 DAAM2Q86T65 1068 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 HOOK3Q86VS8 718 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 FAM228AQ86W67 206 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 DYNLL2Q96FJ2 89 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 XPO6Q96QU8 1125 aaKnown RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.56□□□□□ -0.722e-6■■■■□ 23.9
TUBB1-201ENST00000217133 TRIM6Q9C030 488 aaPredicted RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 ATP6V0A4Q9HBG4 840 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 NOD2Q9HC29 1040 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 SLC24A3Q9HC58 644 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 BLOC1S4Q9NUP1 217 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 SAMD15Q9P1V8 674 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 JAG2Q9Y219 1238 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 NFS1Q9Y697 457 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 TTI1O43156 1089 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 CYTH3O43739 400 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 FAM26FQ5R3K3 315 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 LRCH2Q5VUJ6 765 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 REXO1Q8N1G1 1221 aaKnown RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 MAGEC3Q8TD91 643 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 LMBR1Q8WVP7 490 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 MAD2L2Q9UI95 211 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 POTEMA6NI47 508 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 CCT8L1PA6NM43 557 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 NOL4O94818 638 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 VIMP08670 466 aaKnown RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 MYBP10242 640 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 ERFEQ4G0M1 354 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 LACTB2Q53H82 288 aaPredicted RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 TBC1D1Q86TI0 1168 aaPredicted RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 TAX1BP1Q86VP1 789 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 COL23A1Q86Y22 540 aaPredicted RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 SCFD2Q8WU76 684 aa10.56□□□□□ -0.72
TUBB1-201ENST00000217133 NSUN4Q96CB9 384 aaKnown RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 CALR3Q96L12 384 aaKnown RBP10.56□□□□□ -0.72
TUBB1-201ENST00000217133 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms