RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 ARHGAP27Q6ZUM4 889 aa32.82■■■□□ 2.84
PABPN1-201ENST00000216727 ATG4CQ96DT6 458 aa32.82■■■□□ 2.84
PABPN1-201ENST00000216727 ZHX2Q9Y6X8 837 aa32.82■■■□□ 2.84
PABPN1-201ENST00000216727 HIRAP54198 1017 aaPredicted RBP32.82■■■□□ 2.84
PABPN1-201ENST00000216727 MRPS9P82933 396 aaKnown RBP32.82■■■□□ 2.84
PABPN1-201ENST00000216727 CCDC40Q4G0X9 1142 aa32.82■■■□□ 2.84
PABPN1-201ENST00000216727 NOL9Q5SY16 702 aaKnown RBP32.82■■■□□ 2.84
PABPN1-201ENST00000216727 ANKRD7Q92527 254 aa32.82■■■□□ 2.84
PABPN1-201ENST00000216727 WDR24Q96S15 920 aa32.82■■■□□ 2.84
PABPN1-201ENST00000216727 ZNHIT6Q9NWK9 470 aaKnown RBP32.82■■■□□ 2.84
PABPN1-201ENST00000216727 RSPH10B2B2RC85 870 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 NDUFA10O95299 355 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 RSPH10BP0C881 870 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 CASQ1P31415 396 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 OAZ1P54368 228 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 CDK17Q00537 523 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 MTERF4Q7Z6M4 381 aaKnown RBP32.81■■■□□ 2.84
PABPN1-201ENST00000216727 ACRBPQ8NEB7 543 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 ADAMTS5Q9UNA0 930 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 PHIPQ8WWQ0 1821 aa32.81■■■□□ 2.84
PABPN1-201ENST00000216727 PDXKO00764 312 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 DHX15O43143 795 aaKnown RBP32.8■■■□□ 2.84
PABPN1-201ENST00000216727 EPS15P42566 896 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 NCBP1Q09161 790 aaKnown RBP32.8■■■□□ 2.84
PABPN1-201ENST00000216727 ADAM9Q13443 819 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 REPS2Q8NFH8 660 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 UPF1Q92900 1129 aaKnown RBP eCLIP32.8■■■□□ 2.84
PABPN1-201ENST00000216727 TAAR1Q96RJ0 339 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 AGO4Q9HCK5 861 aaKnown RBP32.8■■■□□ 2.84
PABPN1-201ENST00000216727 LZTFL1Q9NQ48 299 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 RLFQ13129 1914 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 SSC5DA1L4H1 1573 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 SUPT20HL1Q3ZLR7 823 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 RNF207Q6ZRF8 634 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 TRIM59Q8IWR1 403 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 LXNQ9BS40 222 aa32.8■■■□□ 2.84
PABPN1-201ENST00000216727 WRAP73Q9P2S5 460 aaPredicted RBP32.8■■■□□ 2.84
PABPN1-201ENST00000216727 CETN3O15182 167 aa32.79■■■□□ 2.84
PABPN1-201ENST00000216727 HNRNPH3P31942 346 aaKnown RBP32.79■■■□□ 2.84
PABPN1-201ENST00000216727 HOXD13P35453 343 aa32.79■■■□□ 2.84
PABPN1-201ENST00000216727 HMGCS2P54868 508 aa32.79■■■□□ 2.84
PABPN1-201ENST00000216727 PGM5Q15124 567 aa32.79■■■□□ 2.84
PABPN1-201ENST00000216727 LOXHD1Q8IVV2 1947 aa32.79■■■□□ 2.84
PABPN1-201ENST00000216727 DSG3P32926 999 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 MAP7D2Q96T17 732 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 EDEM3Q9BZQ6 932 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 FAM184BQ9ULE4 1060 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 KIF5CO60282 957 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 MYBP10242 640 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 MTMR1Q13613 665 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 WNK4Q96J92 1243 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 SEL1LQ9UBV2 794 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 FZD1Q9UP38 647 aa32.78■■■□□ 2.84
PABPN1-201ENST00000216727 CALUO43852 315 aaPredicted RBP32.77■■■□□ 2.84
PABPN1-201ENST00000216727 FAM13AO94988 1023 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 ARHGAP29Q52LW3 1261 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 MIER3Q7Z3K6 550 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 CCDC170Q8IYT3 715 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 TBC1D22BQ9NU19 505 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 ODF2LQ9ULJ1 636 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 ZBTB39O15060 712 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 EIF3DO15371 548 aaKnown RBP eCLIP32.77■■■□□ 2.84
PABPN1-201ENST00000216727 EIF2AK2P19525 551 aaKnown RBP32.77■■■□□ 2.84
PABPN1-201ENST00000216727 NR2F2P24468 414 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 ZNF131P52739 623 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 ITGB3BPQ13352 177 aaPredicted RBP32.77■■■□□ 2.84
PABPN1-201ENST00000216727 COG2Q14746 738 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 XRRA1Q6P2D8 792 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 RMDN3Q96TC7 470 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 PDCD2LQ9BRP1 358 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 PARVGQ9HBI0 331 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 PXMP2Q9NR77 195 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 RNF146Q9NTX7 359 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 TYW1Q9NV66 732 aaKnown RBP32.77■■■□□ 2.84
PABPN1-201ENST00000216727 PLAGL2Q9UPG8 496 aa32.77■■■□□ 2.84
PABPN1-201ENST00000216727 A0A0U1RQJ8 604 aa32.76■■■□□ 2.83
PABPN1-201ENST00000216727 URI1O94763 535 aaPredicted RBP32.76■■■□□ 2.83
PABPN1-201ENST00000216727 ATRIPQ8WXE1 791 aa32.76■■■□□ 2.83
PABPN1-201ENST00000216727 MMRN2Q9H8L6 949 aa32.76■■■□□ 2.83
PABPN1-201ENST00000216727 PRPF6O94906 941 aaKnown RBP32.75■■■□□ 2.83
PABPN1-201ENST00000216727 P4HBP07237 508 aaKnown RBP32.75■■■□□ 2.83
PABPN1-201ENST00000216727 FAM207AQ9NSI2 230 aaPredicted RBP32.75■■■□□ 2.83
PABPN1-201ENST00000216727 REXO2Q9Y3B8 237 aaKnown RBP32.75■■■□□ 2.83
PABPN1-201ENST00000216727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP32.75■■■□□ 2.83
PABPN1-201ENST00000216727 ATP2A1O14983 1001 aa32.75■■■□□ 2.83
PABPN1-201ENST00000216727 GCNT3O95395 438 aa32.75■■■□□ 2.83
PABPN1-201ENST00000216727 GUCY2CP25092 1073 aa32.75■■■□□ 2.83
PABPN1-201ENST00000216727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.75■■■□□ 2.832e-9■■■■□ 21.3
PABPN1-201ENST00000216727 IRX2Q9BZI1 471 aaPredicted RBP32.75■■■□□ 2.83
PABPN1-201ENST00000216727 ZSWIM4Q9H7M6 989 aa32.75■■■□□ 2.83
PABPN1-201ENST00000216727 MYO1AQ9UBC5 1043 aa32.75■■■□□ 2.83
PABPN1-201ENST00000216727 RIPK3Q9Y572 518 aa32.75■■■□□ 2.83
PABPN1-201ENST00000216727 SBF1O95248 1867 aa32.74■■■□□ 2.83
PABPN1-201ENST00000216727 CYLC1P35663 651 aaPredicted RBP32.74■■■□□ 2.83
PABPN1-201ENST00000216727 ARHGAP25P42331 645 aa32.74■■■□□ 2.83
PABPN1-201ENST00000216727 NSMFQ6X4W1 530 aa32.74■■■□□ 2.83
PABPN1-201ENST00000216727 CATSPERGQ6ZRH7 1159 aa32.74■■■□□ 2.83
PABPN1-201ENST00000216727 FRMD5Q7Z6J6 570 aa32.74■■■□□ 2.83
PABPN1-201ENST00000216727 BANK1Q8NDB2 785 aa32.74■■■□□ 2.83
PABPN1-201ENST00000216727 ZNF214Q9UL59 606 aaPredicted RBP32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms