RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Hook2Q7TMK6 716 aa13.21□□□□□ -0.3
Herc4-208ENSMUST00000219577 Celf4Q7TSY6 486 aa13.21□□□□□ -0.3
Herc4-208ENSMUST00000219577 Tldc1Q8K0P3 455 aa13.21□□□□□ -0.3
Herc4-208ENSMUST00000219577 Calml4Q91WQ9 153 aa13.21□□□□□ -0.3
Herc4-208ENSMUST00000219577 Gimap9G3X987 291 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Akap2O54931 893 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Mgat1P27808 447 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Nhej1Q3KNJ2 295 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Zbtb7bQ64321 544 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 SpidrQ8BGX7 933 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 IntS13Q8QZV7 732 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Nxf1Q99JX7 618 aaKnown RBP13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 PdhbQ9D051 359 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Pagr1bF6V0H0 108 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Etv6P97360 485 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Tubb5P99024 444 aaKnown RBP13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 PnocQ64387 187 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Calhm4Q8CE93 315 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 CbsQ91WT9 561 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Pagr1aQ99L02 253 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Mis12Q9CY25 206 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Spata17Q9D552 379 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 1700017N19RikA0A087WPJ1 469 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Prkg1P0C605 671 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Rpl13P47963 211 aaKnown RBP13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Tubb4bP68372 445 aaKnown RBP13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Tex35Q14BK3 207 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Depdc1bQ8BH88 529 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Nop53Q8BK35 484 aaKnown RBP13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Mrgprx1Q8CIP3 322 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Rbm41Q8JZV4 413 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Capn9Q9D805 690 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Capn15Q9JLG8 1095 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Trim55G3X8Y1 545 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 H2afzP0C0S6 128 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Hsd17b1P51656 344 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 H2afvQ3THW5 128 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Mettl25Q6NXH8 597 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 P2ry10Q8BFU7 328 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Dhx58Q99J87 678 aa13.2□□□□□ -0.3
Herc4-208ENSMUST00000219577 Clcn6O35454 870 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 OatP29758 439 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 SlmapQ3URD3 845 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 HarsQ61035 509 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Kbtbd4Q8R179 534 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Osbpl1aQ91XL9 950 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Inpp4aQ9EPW0 939 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Tnip1Q9WUU8 647 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Gm28036V9GXJ1 658 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Myh15E9Q264 1925 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Slc27a3O88561 667 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Ctnna1P26231 906 aaKnown RBP13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Lrriq3Q14DL3 633 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Nr1d1Q3UV55 615 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Ice2Q3UZ18 988 aaKnown RBP13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 ItgaeQ60677 1167 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 TbataQ7TSD4 393 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Chtf18Q8BIW9 969 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Stap2Q8R0L1 411 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Chn1Q91V57 459 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Six6os1Q9CTN5 574 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Ddx47Q9CWX9 455 aaKnown RBP13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Cmtm5Q9D6G9 156 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Gm45194A0A140LJG2 572 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Akr1b10G5E895 316 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Esr2O08537 530 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 PurbO35295 324 aaKnown RBP13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Sema3fO88632 785 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Atp8a1P70704 1164 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Ccdc114Q3UX62 658 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 Pip5kl1Q6U7H8 395 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 PaoxQ8C0L6 504 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 HyiQ8R1F5 277 aa13.19□□□□□ -0.3
Herc4-208ENSMUST00000219577 DtnbO70585 659 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Stat4P42228 749 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Wee1P47810 646 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Surf6P70279 355 aaKnown RBP13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Q3TTJ4 293 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Scaf8Q6DID3 1268 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Bank1Q80VH0 783 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Armc6Q8BNU0 468 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Fam228aQ8CDW1 299 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Pak2Q8CIN4 524 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Dr1Q91WV0 176 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Cmtr1Q9DBC3 837 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 DgkkE9Q7N4 1118 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Gm4758L7N258 96 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Kcnu1O54982 1121 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Tnnc1P19123 161 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Fhod1Q6P9Q4 1197 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Tmc4Q7TQ65 694 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Morc2bQ8C5W4 1022 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Pop1Q8K205 1045 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Ribc1Q9D0B8 379 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Btbd18A0A0A6YY25 723 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Orc4O88708 433 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Vps41Q5KU39 853 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Psmd2Q8VDM4 908 aa13.18□□□□□ -0.3
Herc4-208ENSMUST00000219577 Ankrd31A0A140LI88 1765 aa13.17□□□□□ -0.3
Herc4-208ENSMUST00000219577 Proser2Q8C5R2 471 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 80.1 ms