RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Krt9Q6RHW0 743 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Gpr101Q80T62 511 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Asic2Q925H0 512 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Arfgap2Q99K28 520 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Kif17Q99PW8 1038 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Tex21Q9R0U9 575 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Cul1Q9WTX6 776 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Gm5114W4VSN8 858 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Col4a5Q63ZW6 1691 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Map7d1A2AJI0 846 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Wdr72D3YYM4 1114 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 A430078G23RikE9Q7Y4 484 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Klc1O88447 541 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Gna15P30678 374 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Gdf10P97737 476 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Gdpd4Q3TT99 632 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Fam183bQ5NC57 135 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Scfd2Q8BTY8 684 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ccdc134Q8C7V8 229 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Onecut3Q8K557 490 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 AagabQ8R2R3 316 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Sgms1Q8VCQ6 419 aa12.36□□□□□ -0.43
Lig1-211ENSMUST00000177588 Nup188Q6ZQH8 1759 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Zfp831A2ADM8 1628 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Osbpl9A2A8Z1 736 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 DgkiD3YWQ0 1071 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 TyrobpO54885 114 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Grem2O88273 168 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ctnna1P26231 906 aaKnown RBP12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ap1m1P35585 423 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Sept2P42208 361 aaKnown RBP12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Tmod1P49813 359 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Cracr2aQ3UP38 310 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 WdpcpQ8C456 722 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 SltmQ8CH25 1031 aaKnown RBP12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Tut1Q8R3F9 869 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ddah1Q9CWS0 285 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Galntl5Q9D4M9 431 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Trmt112Q9DCG9 125 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Chd5A2A8L1 1946 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Mtcl1Q3UHU5 1945 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Vmn2r79E9Q067 851 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Rfpl4bJ3QPR6 266 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Pgrmc1O55022 195 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ncf2O70145 525 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Orc4O88708 433 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Csf1rP09581 977 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Tnfaip8l3Q3TBL6 204 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 KaznQ69ZS8 779 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Galnt17Q7TT15 598 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Pdzph1Q8BGR1 1238 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Sept14Q9DA97 430 aa12.35□□□□□ -0.43
Lig1-211ENSMUST00000177588 Fam71aB7XG49 585 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Kcnh2O35219 1162 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Trappc3O55013 180 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 DnttP09838 530 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Tal1P22091 329 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Anks6Q6GQX6 883 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ccdc189Q6NZQ0 333 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 March6Q6ZQ89 909 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Actn1Q7TPR4 892 aaKnown RBP12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 E330017A01RikQ8BU47 192 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Als2cr12Q8BVM7 383 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Lrrc45Q8CIM1 670 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ube2q2Q8K2Z8 378 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Cacnb1Q8R3Z5 597 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Senp2Q91ZX6 588 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Tsnaxip1Q99P25 704 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 RnmtQ9D0L8 465 aaKnown RBP12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ddx25Q9QY15 484 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 EmcnQ9R0H2 261 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Rbm6S4R1W5 1118 aaKnown RBP12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 A0A286YCQ6 122 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Gucy1b3O54865 620 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Lmnb1P14733 588 aaKnown RBP12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 PrphP15331 475 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Q32P12 615 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ice2Q3UZ18 988 aaKnown RBP12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Map3k12Q60700 888 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Nell2Q61220 819 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 E2f5Q61502 335 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Q6PD19 689 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Cnot10Q8BH15 744 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Csgalnact2Q8C1F4 542 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Fermt3Q8K1B8 665 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Akap8Q9DBR0 687 aaKnown RBP12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Entpd5Q9WUZ9 427 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Cog1Q9Z160 980 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Slfn14V9GXG1 899 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Nsun7Q14AW5 724 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Dpcr1Q3TNW5 500 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Tspyl3Q3UYP3 334 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Znf697Q569E7 569 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ehbp1Q69ZW3 1231 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 ErfeQ6PGN1 340 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 FtoQ8BGW1 502 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ppm1fQ8CGA0 452 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ciapin1Q8WTY4 309 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Ppp1r3aQ99MR9 1089 aa12.34□□□□□ -0.43
Lig1-211ENSMUST00000177588 Psma8Q9CWH6 250 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms