RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 PhkbQ7TSH2 1085 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Snrnp27Q8K194 155 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Prpf3Q922U1 683 aaKnown RBP12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cdc27A2A6Q5 825 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm3127E9Q9P5 263 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm3453K7N724 263 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Atp8b1Q148W0 1251 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ttf2Q5NC05 1138 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Acad11Q80XL6 779 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 L3mbtl3Q8BLB7 883 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kcns3Q8BQZ8 491 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 IarsQ8BU30 1262 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ppp4r4Q8C0Y0 875 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Spata32Q8C5V0 334 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rabep2Q91WG2 554 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 4930519G04RikQ9CPT7 205 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Klhl41A2AUC9 606 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 InhbaQ04998 424 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ccdc125Q5U465 500 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Zcwpw1Q6IR42 630 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Fam118bQ8C569 351 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Caln1Q9JJG7 219 aa12.61□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kdm5aQ3UXZ9 1690 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Lrig2Q52KR2 1054 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cyfip2Q5SQX6 1253 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sept9Q80UG5 583 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Nkiras1Q8CEC5 192 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Tmem60Q8K174 133 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Chmp2aQ9DB34 222 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Xab2Q9DCD2 855 aaKnown RBP12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gtf2ird1Q9JI57 1104 aaKnown RBP12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Vnn1Q9Z0K8 512 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 C2cd2E9Q3C1 696 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kcnh2O35219 1162 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Stag2O35638 1231 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ephb4P54761 987 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Exosc10P56960 887 aaKnown RBP12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 RubcnQ80U62 956 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cpa5Q8R4H4 436 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ppp2r5dQ91V89 594 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Atp6v1b1Q91YH6 513 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Trim59Q922Y2 403 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 SufuQ9Z0P7 484 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 GsdmeQ9Z2D3 512 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Myo3bQ1EG27 1305 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 H2afxP27661 143 aaKnown RBP12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Mybl1P51960 751 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ankmy2Q3TPE9 440 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ppp2r2aQ6P1F6 447 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 LnpkQ7TQ95 425 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 AmphQ7TQF7 686 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kcnv2Q8CFS6 562 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Kat14Q8CID0 779 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ttll1Q91V51 423 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Krt34Q9D646 392 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Sertad1Q9JL10 236 aa12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Pbrm1Q8BSQ9 1634 aaKnown RBP12.6□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Klhl34A2AI76 644 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Hnrnph1O35737 449 aaKnown RBP12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Prl2c3P04768 224 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Myl1P05977 188 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Nedd4P46935 887 aaKnown RBP12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Trpc6Q61143 930 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Celf4Q7TSY6 486 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Clec4gQ8BNX1 294 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 McamQ8R2Y2 648 aaKnown RBP12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 MgarpQ8VI64 283 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ddx47Q9CWX9 455 aaKnown RBP12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Nde1Q9CZA6 344 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ccdc97Q9DBT3 340 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Rnf14Q9JI90 485 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Robo2Q7TPD3 1470 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Apba1B2RUJ5 842 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 CaluO35887 315 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Man1a2P39098 641 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gjb6P70689 261 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Myo6Q64331 1265 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Fbxo41Q6NS60 873 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Hdac10Q6P3E7 666 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 PreplQ8C167 725 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Cbwd1Q8VEH6 393 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Q91WD4 421 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 H2-OaQ9QWV1 250 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Add1Q9QYC0 735 aaKnown RBP12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 GgcxQ9QYC7 757 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Prss51A0A286YDY8 319 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Timm44O35857 452 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Pcdha4O88689 947 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Slc4a1P04919 929 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Actn1Q7TPR4 892 aaKnown RBP12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Akt1s1Q9D1F4 257 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Ddx24Q9ESV0 857 aaKnown RBP12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Serpina3iD3Z450 408 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Olfr552E9Q545 317 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Gm7995L7N2E4 160 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Exoc7O35250 697 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Serpini1O35684 410 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Akr1b1P45376 316 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Slc7a1Q09143 622 aa12.59□□□□□ -0.39
Ndc1-204ENSMUST00000139560 Luc7l3Q5SUF2 432 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms