RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Fam102bQ8BQS4 339 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ints9Q8K114 658 aaKnown RBP8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Grin3bQ91ZU9 1003 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 1700020D05RikQ99PB1 294 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Syap1Q9D5V6 365 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Nrxn3Q6P9K9 1571 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Arhgap42B2RQE8 841 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ccdc78D3Z5T1 437 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Rtn2O70622 471 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Traf3ip1Q149C2 625 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Map3k7Q62073 579 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Q6PD19 689 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Tlr11Q6R5P0 926 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Prpf38bQ80SY5 542 aaKnown RBP8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Sdccag8Q80UF4 717 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Arhgap24Q8C4V1 747 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Cabs1Q8C633 391 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 AmotQ8VHG2 1126 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ciao1Q99KN2 339 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 4931423N10RikQ9D4J9 382 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Etnk1Q9D4V0 363 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Pcdh11xF6ZNL5 1338 aa8.11□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Patl2A2ARM1 529 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Lrrc23O35125 340 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Calm1P0DP26 149 aaKnown RBP8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Calm2P0DP27 149 aaKnown RBP8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Calm3P0DP28 149 aaKnown RBP8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gna15P30678 374 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Serpinc1P32261 465 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Fam89aQ14BJ1 175 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Acot10Q32MW3 439 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 ZyxQ62523 564 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Tmcc1Q69ZZ6 649 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Wasf2Q8BH43 497 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Btbd9Q8C726 612 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Mzf1S4R1L6 814 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Atp2c2A7L9Z8 944 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Mroh9G5E8L9 891 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 SarsP26638 512 aaKnown RBP8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 HpdP49429 393 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Nol4P60954 483 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gm5168Q4KL04 211 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Krt14Q61781 484 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Bola2Q8BGS2 86 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Pnpt1Q8K1R3 783 aaKnown RBP8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Glrx3Q9CQM9 337 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Fgfr1op2Q9CRA9 253 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Myo1hQ9D6A1 958 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gsdmdc1Q9D8T2 487 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 MajinQ9D992 256 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gtf2h1Q9DBA9 547 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ddx25Q9QY15 484 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 PodxlQ9R0M4 503 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 MypnQ5DTJ9 1315 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Thsd7aQ69ZU6 1645 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Fam171a1A2ATK9 892 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gm14525B1AZA0 212 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gm4307E9PZY4 289 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gm4312K9J7E2 289 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Snx3O70492 162 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Cyp2b9P12790 491 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Pde6bP23440 856 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 RxrbP28704 520 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Sar1aP36536 198 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Kpnb1P70168 876 aaKnown RBP8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Tcerg1lQ3B807 590 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gm14819Q62478 212 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Atg9aQ68FE2 551 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Fbxo41Q6NS60 873 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 GmipQ6PGG2 971 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ttc19Q8CC21 365 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ubac1Q8VDI7 409 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Alpk1Q9CXB8 1231 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gpatch1Q9DBM1 930 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 PyglQ9ET01 850 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Pard6bQ9JK83 371 aa8.1□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Btbd18A0A0A6YY25 723 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Apol7aB2RT54 418 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Zfp651E9PZ11 729 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Unc5cO08747 931 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 ZfxP17012 799 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 PctpP53808 214 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Psmc4P54775 418 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Pyroxd1Q3TMV7 498 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Slc10a4Q3UEZ8 437 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Adad1Q5SUE7 619 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ksr1Q61097 873 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Rnf220Q6PDX6 566 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Galnt17Q7TT15 598 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Ankrd13aQ80UP5 588 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Armcx3Q8BHS6 379 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Efl1Q8C0D5 1127 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 LzicQ8K3C3 190 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Lrrc14Q8VC16 493 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 AticQ9CWJ9 592 aaKnown RBP8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 IydQ9DCX8 285 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 PycardQ9EPB4 193 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Robo1O89026 1612 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 B020011L13RikA0A087WQI7 412 aa8.09□□□□□ -1.11
Bdnf-204ENSMUST00000111044 Gpr161B2RPY5 545 aa8.09□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms