RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Mipol1Q9D9F8 279 aa25.14■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Apol7aB2RT54 418 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Gml2G5E8L7 176 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Myo1aO88329 1043 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Mt-CybP00158 381 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Cyp2c37P56654 490 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Setd4P58467 439 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Fam189a2Q4FZH1 290 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Dph1Q5NCQ5 438 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Gas7Q60780 421 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Trpc6Q61143 930 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 ShbQ6PD21 503 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 NfrkbQ6PIJ4 1296 aaKnown RBP25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Cyp2c54Q6XVG2 490 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Cyp2c50Q91X77 490 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Rbp7Q9EPC5 134 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Eif2ak1Q9Z2R9 619 aa25.13■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Jakmip2D3YXK0 820 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Pdzrn4E9PUZ9 1014 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Gm3095E9Q058 166 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Tpm2P58774 284 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Ppm1jQ149T7 507 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Specc1lQ2KN98 1118 aaKnown RBP25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Etaa1Q5SVT3 877 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Cdc37Q61081 379 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Nek9Q8K1R7 984 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Magi2Q9WVQ1 1275 aa25.12■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Barx2O08686 283 aa25.11■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Ccdc85aQ5SP85 500 aa25.11■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Foxd1Q61345 456 aa25.11■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Trim47Q8C0E3 641 aa25.11■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Slc25a38Q91XD8 326 aa25.11■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Ubxn11Q9D572 484 aa25.11■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Itga2bQ9QUM0 1033 aa25.11■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Rsph10bE9PYQ0 876 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Rbp3P49194 1234 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Cdkn1cP49919 348 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Tpm1P58771 284 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Anks1aP59672 1150 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Lmntd2Q0VET5 664 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Ric8aQ3TIR3 530 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Mettl14Q3UIK4 456 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Olfr832Q7TRG9 312 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Usp6nlQ80XC3 819 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Pramel7Q810Y8 479 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Sun2Q8BJS4 731 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Drd5Q8BLD9 478 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Washc1Q8VDD8 475 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Me2Q99KE1 589 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Pkp2Q9CQ73 795 aaKnown RBP25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Haus2Q9CQS9 234 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Dis3Q9CSH3 958 aaKnown RBP25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Rhobtb3Q9CTN4 611 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Kdm8Q9CXT6 414 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Serpinb12Q9D7P9 423 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 SelenooQ9DBC0 667 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 PolkQ9QUG2 852 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Sbno2Q7TNB8 1349 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Gm5934D3Z4U6 212 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 NcapgE9PWG6 1004 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 GpiP06745 558 aaKnown RBP25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Nol4P60954 483 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Rit2P70425 217 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Exoc1Q8R3S6 894 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 GldcQ91W43 1025 aa25.1■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Mia3Q8BI84 1930 aa25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Hmgb1P63158 215 aaKnown RBP25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Mcm6P97311 821 aa25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Tbc1d22bQ80VE5 505 aa25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Brd3Q8K2F0 726 aaKnown RBP25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Hdhd5Q91WM2 419 aa25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Msgn1Q9JK54 188 aa25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Col4a3Q9QZS0 1669 aa25.09■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Olfr67F8VPJ8 320 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Serpina1aP07758 413 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Serpina1bP22599 413 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Serpina1cQ00896 412 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Serpina1dQ00897 413 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Kcnd1Q03719 651 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Krt9Q6RHW0 743 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Pnma3Q8JZW8 466 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Itgbl1Q8VDV0 494 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Socs7Q8VHQ2 579 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Pqbp1Q91VJ5 263 aaKnown RBP25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 Pbx4Q99NE9 378 aa25.08■■□□□ 1.61
Scn1b-201ENSMUST00000098548 SktA2AQ25 1946 aaKnown RBP25.08■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Plxnb3Q9QY40 1902 aa25.08■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Lama2Q60675 3118 aaKnown RBP25.08■■□□□ 1.6
Scn1b-201ENSMUST00000098548 PpardP35396 440 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Arhgap1Q5FWK3 439 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Mybpc2Q5XKE0 1136 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ppp2r5cQ60996 524 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tbc1d10bQ8BHL3 798 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Snx17Q8BVL3 470 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Tmem134Q8R0J4 195 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Ces4aQ8R0W5 563 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 SrcapA0A087WQ44 3271 aa25.07■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Trip11E9Q512 1976 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Gm11549A0A286YD83 63 aa25.06■■□□□ 1.6
Scn1b-201ENSMUST00000098548 Timm44O35857 452 aa25.06■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms