RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 GmipQ6PGG2 971 aa13.3□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Ddx39aQ8VDW0 427 aaKnown RBP13.3□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Vwa5aQ99KC8 793 aaKnown RBP13.3□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pagr1bF6V0H0 108 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Arhgap6O54834 987 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Dclk2Q6PGN3 756 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 RubcnQ80U62 956 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Wdr27Q8C5V5 780 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pagr1aQ99L02 253 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Lzts3A2AHG0 700 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Cylc2B1AWN8 422 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Snrnp35Q9D384 244 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Trim54Q9ERP3 366 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Igsf1Q7TQA1 1317 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Fam208aQ69ZR9 1610 aaKnown RBP13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pms2P54279 859 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Trim72Q1XH17 477 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Ppp2r2aQ6P1F6 447 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Mfap3lQ9D3X9 409 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Zcchc17Q9ESX4 241 aaKnown RBP13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Gfpt2Q9Z2Z9 682 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Apol6B7ZC55 329 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Hspa4lP48722 838 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 GartQ64737 1010 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Znf219Q6IQX8 726 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Washc5Q8C2E7 1159 aaKnown RBP13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Veph1A1A535 833 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Myo1eE9Q634 1107 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Cyth2P63034 400 aaKnown RBP13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Parp3Q3ULW8 533 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 TbcbQ9D1E6 244 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Adrm1Q9JKV1 407 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 GssP51855 474 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Cops2P61202 443 aaKnown RBP13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Apobec2Q9WV35 224 aa13.29□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Gm28961A0A087WPA5 222 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Gm21858A0A087WQ24 222 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Lrch2Q3UMG5 773 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Spag6Q3V0U9 509 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Serpinb6Q60854 378 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 GlyctkQ8QZY2 523 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Ccdc22Q9JIG7 627 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Art2bO35975 289 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Rnf10Q3UIW5 804 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Clcn6O35454 870 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Scg2Q03517 617 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Zbtb40Q6PCS8 1258 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Slc26a6Q8CIW6 758 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Def8Q99J78 448 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Sun1Q9D666 913 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 FliiQ9JJ28 1271 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Sec24cG3X972 1096 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 P4hbP09103 509 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Rps8P62242 208 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 LzicQ8K3C3 190 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Serpina9Q9D7D2 418 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 EcsitQ9QZH6 435 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Cdc42bpaQ3UU96 1719 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Tcp11x2A2AEI7 503 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Mup5P11591 180 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pde6aP27664 859 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Vps4bP46467 444 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 G3bp2P97379 482 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Ccdc185Q3V118 621 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Ndst4Q9EQW8 872 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Cog1Q9Z160 980 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Cdca7lQ922M5 438 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Snf8Q9CZ28 258 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pdzd9Q9D9M4 266 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Atp10aO54827 1508 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Gm10250G3X9L6 160 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Ankrd13cQ3UX43 541 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Otub1Q7TQI3 271 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 CoasyQ9DBL7 563 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Atp5hQ9DCX2 161 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Scaf11E9PZM7 1456 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Lrrc32G3XA59 663 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Serpina1bP22599 413 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Gimap4Q99JY3 219 aa13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pdxdc1Q99K01 787 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Add3Q9QYB5 706 aaKnown RBP13.28□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Eno3P21550 434 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pdha1P35486 390 aaKnown RBP13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 NficP70255 439 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Arl6ip4Q9JM93 229 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Tbc1d19Q8VDV7 526 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Abcc1O35379 1528 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 TprnA2AI08 749 aaKnown RBP13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Zyg11aA2BFL2 627 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Glt1d1A4FUP9 346 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Sult1d1Q3UZZ6 295 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Tbc1d1Q60949 1255 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Med21Q9CQ39 144 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Pole3Q9JKP7 145 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Ggps1Q9WTN0 300 aa13.27□□□□□ -0.28
Vcpip1-201ENSMUST00000057438 Gm3402K7N5P2 326 aa13.27□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Rps6kc1Q8BLK9 1056 aa13.27□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Hif1aQ61221 836 aaKnown RBP13.27□□□□□ -0.29
Vcpip1-201ENSMUST00000057438 Dnajc3Q91YW3 504 aa13.27□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms