RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 PalmdQ9JHU2 551 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 CenphQ9QYM8 241 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Scnn1bQ9WU38 638 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Casz1Q9CWL2 1761 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Kif3cO35066 796 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Nedd1P33215 660 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 CebpzP53569 1052 aaKnown RBP7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Lamb3Q61087 1168 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 CtcfQ61164 736 aaKnown RBP7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Herc4Q6PAV2 1057 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Kdm4cQ8VCD7 1054 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Hps3Q91VB4 1002 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Josd2Q9CR30 188 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mtmr1Q9Z2C4 669 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Trpm7Q923J1 1863 aa7.63□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Slc6a21A0A1B0GSD2 748 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Vti1aO89116 217 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gcnt1Q09324 428 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Usp49Q6P9L4 685 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 NfrkbQ6PIJ4 1296 aaKnown RBP7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mknk2Q8CDB0 459 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Fuca2Q99KR8 461 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Grpel1Q99LP6 217 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Tmem39aQ9CYC3 486 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Noxred1Q9D3S5 366 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Olr1Q9EQ09 363 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 TrioQ0KL02 3102 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Grin1P35438 938 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Phlda1Q62392 405 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Nap1l4Q78ZA7 375 aaKnown RBP7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Pnma1Q8C1C8 353 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Inpp5fQ8CDA1 1132 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Q8K2W9 541 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Smc1bQ920F6 1248 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Aox1O54754 1333 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Zfp853A0A1D5RM95 733 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ccl26F8VQM2 93 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Slc6a20bO88575 635 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 P4hbP09103 509 aaKnown RBP7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Wnt7aP24383 349 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 GaaP70699 953 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Hook2Q7TMK6 716 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 FtoQ8BGW1 502 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cep85Q8BMK0 761 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 N4bp3Q8C7U1 537 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Stoml1Q8CI66 399 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ero1aQ8R180 464 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ddx41Q91VN6 622 aaKnown RBP7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gins2Q9D600 185 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rpap3Q9D706 660 aa7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Wdr33Q8K4P0 1330 aaKnown RBP7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Rbbp6P97868 1790 aaKnown RBP7.62□□□□□ -1.19
Bdnf-201ENSMUST00000053317 OgdhlE9Q7L0 1029 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 ImpactO55091 318 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 PrkceP16054 737 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Il2rbP16297 539 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mcm6P97311 821 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gbp1Q01514 589 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cep112Q5PR68 954 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Bcar1Q61140 874 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Trmt13Q8BYH3 481 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Adnp2Q8CHC8 1165 aaKnown RBP7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mtmr3Q8K296 1196 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mipol1Q9D9F8 279 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Sall1Q9ER74 1322 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cyp2j7A0A140T8U1 504 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Sdc2P43407 202 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Dpf3P58269 378 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Etv6P97360 485 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Pank2Q3U4S0 443 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 DeptorQ570Y9 409 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Esyt3Q5DTI8 891 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Q5XFZ0 217 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ccdc122Q8BVN0 290 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 CenpqQ9CPQ5 267 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Galnt15Q9D2N8 638 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Asah2Q9JHE3 756 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Usp31E9Q6Y8 1344 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Map1bP14873 2464 aaKnown RBP7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 GclmO09172 274 aaKnown RBP7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 PpardP35396 440 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ssrp1Q08943 708 aaKnown RBP7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Trappc10Q3TLI0 1259 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cyp7b1Q60991 507 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Acot5Q6Q2Z6 421 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 PoliQ6R3M4 717 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 GypcQ78HU7 95 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Ankfy1Q810B6 1169 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Dusp4Q8BFV3 398 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 4933409G03RikQ8C5U0 320 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 ClasrpQ8CFC7 668 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Vps18Q8R307 973 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Plekha4Q8VC98 588 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mageb3Q9D2H4 330 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Mmel1Q9JLI3 765 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Plod3Q9R0E1 741 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Cntnap2Q9CPW0 1332 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Itgb4A2A863 1818 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Clec11aO88200 328 aa7.61□□□□□ -1.19
Bdnf-201ENSMUST00000053317 Gfpt1P47856 697 aa7.61□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms