RNA–Protein interactions for RNA: ENSMUST00000046207.8

Sf3b6-201, Transcript of Splicing factor 3B subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b6, Length 1,180 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6-201ENSMUST00000046207 Cyp26a1O55127 497 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 ArP19091 899 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Actr2P61161 394 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 MycbpapQ5SUV2 932 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Enpp3Q6DYE8 874 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 GypcQ78HU7 95 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Nipa1Q8BHK1 323 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Smarcal1Q8BJL0 910 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Zfp120Q8BZW4 436 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Tshz3Q8CGV9 1081 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Atf7Q8R0S1 413 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Ushbp1Q8R370 680 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Lmbr1Q9JIT0 490 aa17.52■□□□□ 0.4
Sf3b6-201ENSMUST00000046207 Cyp4a29A0A087WPC3 509 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Xpnpep3B7ZMP1 506 aaKnown RBP17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Vmn2r23E9PXI5 849 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gm3164L7N2B9 238 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gm3264L7N2C5 238 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Erbb2P70424 1256 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ctnnb1Q02248 781 aaKnown RBP17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gcnt1Q09324 428 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Dennd1bQ3U1T9 766 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Srd5a1Q68FF9 255 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 ChpfQ6IQX7 774 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Rps6kc1Q8BLK9 1056 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ncaph2Q8BSP2 607 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 4933409G03RikQ8C5U0 320 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 RadxQ8C779 850 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ces1Q8VCC2 565 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Olfr397Q8VEZ6 315 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ppp6r3Q922D4 844 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 VasnQ9CZT5 673 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Drc3Q9D5E4 523 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Habp4Q9JKS5 411 aaKnown RBP17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ubxn8Q9QZ49 277 aa17.51■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Igkv10-96A0A140T8M1 115 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Fbxl16A2RT62 479 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Me1P06801 572 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Pgk1P09411 417 aaKnown RBP17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 DmpkP54265 631 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 KhsrpQ3U0V1 748 aaKnown RBP17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Znf652Q5DU09 608 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Uimc1Q5U5Q9 727 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Elavl4Q61701 385 aaKnown RBP17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 VmacQ8BP01 174 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 N4bp3Q8C7U1 537 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Appl2Q8K3G9 662 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Prkrip1Q9CWV6 186 aaKnown RBP17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Drap1Q9D6N5 205 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gabbr1Q9WV18 960 aa17.5■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Myh9Q8VDD5 1960 aaKnown RBP17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Aox1O54754 1333 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Dhx15O35286 795 aaKnown RBP17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ckap2Q3V1H1 664 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Wdr44Q6NVE8 915 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Q6P2K3 674 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Mindy1Q76LS9 468 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Celf4Q7TSY6 486 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Npas4Q8BGD7 802 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Fam49aQ8BHZ0 323 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Bola3Q8CEI1 110 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Plcd3Q8K2J0 785 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Q9CYI0 393 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 PycardQ9EPB4 193 aa17.49■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Arhgef10lA2AWP8 1280 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Pfkfb3A7UAK5 555 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gfpt1P47856 697 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gbp1Q01514 589 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Nhlh1Q02576 133 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Nucb1Q02819 459 aaKnown RBP17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gm3414Q3TNU4 584 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Fam198aQ3UY90 562 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Znrf3Q5SSZ7 913 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 F13a1Q8BH61 732 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Jakmip1Q8BVL9 626 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gpc5Q8CAL5 572 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 CerkQ8K4Q7 531 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Vmn1r65Q9EPS7 332 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Dnajb7Q9QYI8 312 aa17.48■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Zfp472B0V2W5 534 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Slc4a5E9Q3M5 1116 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 AlyrefO08583 255 aaKnown RBP17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 MafgO54790 162 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 C87499Q3UX49 493 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Daam2Q80U19 1115 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 P2ry10Q8BFU7 328 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Fbxo44Q8BK26 255 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 B3galt6Q91Z92 325 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Tas1r3Q925D8 858 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Plagl2Q925T4 496 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 KnstrnQ9D9Z1 312 aaKnown RBP17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Extl2Q9ES89 330 aa17.47■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ptchd4B9EKX1 904 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Yme1l1O88967 715 aaKnown RBP17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Ms4a2P20490 235 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Smad4P97471 551 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Nfe2Q07279 373 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Cdca2Q14B71 982 aaKnown RBP17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Prss36Q5K2P8 849 aa17.46■□□□□ 0.39
Sf3b6-201ENSMUST00000046207 Gprc5aQ8BHL4 356 aa17.46■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms