RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Kcng1A2BDX4 514 aa11.52□□□□□ -0.56
Limch1-201ENSMUST00000038188 Trim30cD3YVI9 513 aa11.52□□□□□ -0.56
Limch1-201ENSMUST00000038188 Phka1P18826 1241 aa11.52□□□□□ -0.56
Limch1-201ENSMUST00000038188 Fam8a1Q3URQ4 399 aa11.52□□□□□ -0.56
Limch1-201ENSMUST00000038188 Nrde2Q80XC6 1172 aa11.52□□□□□ -0.56
Limch1-201ENSMUST00000038188 Camkk2Q8C078 588 aa11.52□□□□□ -0.56
Limch1-201ENSMUST00000038188 Mlc1Q8VHK5 382 aa11.52□□□□□ -0.56
Limch1-201ENSMUST00000038188 Ttc41Q692V3 1318 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Skint7A7XV04 395 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gnat1P20612 350 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 TchpQ3TVW5 497 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 E2f8Q58FA4 860 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 RadilQ69Z89 1099 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Polr2eQ80UW8 210 aaKnown RBP11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Mb21d2Q8C525 428 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 DexiQ9WUQ7 95 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 SbdsP70122 250 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Myo1fP70248 1099 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 CkbQ04447 381 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ppp1r13bQ62415 1087 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Krt39Q6IFX4 482 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ctdp1Q7TSG2 960 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Entpd3Q8BFW6 529 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ppp4r1Q8K2V1 951 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 YwhabQ9CQV8 246 aaKnown RBP11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Fam114a1Q9D281 569 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gm7356A0A087WSA6 508 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ism1A2ATD1 454 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cdh18E9Q9Q6 790 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 FpgsP48760 587 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 PRAG1Q571I4 1179 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Best3Q6H1V1 669 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Atp6ap2Q9CYN9 350 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cfap57Q9D180 1249 aa11.52□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gm5624F6ZZG8 207 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Hdhd2Q3UGR5 259 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Lrch2Q3UMG5 773 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ccdc42Q5SV66 316 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Sec62Q8BU14 398 aaKnown RBP11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ephb1Q8CBF3 984 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ccdc152E9PX14 254 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Clcn3P51791 818 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Pcsk1P63239 753 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Mgat3Q10470 538 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Fkbp3Q62446 224 aaKnown RBP11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Kbtbd4Q8R179 534 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 4933402E13RikQ9D4D2 429 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rpap3Q9D706 660 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Zc3h15Q3TIV5 426 aaKnown RBP11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cfap100Q80VN0 613 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ndufb9Q9CQJ8 179 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Ubxn8Q9QZ49 277 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gm5168Q4KL04 211 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Tshz1Q5DTH5 1084 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Zfp202Q8C879 641 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Trim54Q9ERP3 366 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Robo1O89026 1612 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rnf19bA2A7Q9 732 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 AoahO35298 574 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 NfiaQ02780 532 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 Slc9a1Q61165 820 aa11.51□□□□□ -0.57
Limch1-201ENSMUST00000038188 TroapB7ZNG4 668 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 CaluO35887 315 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 PrkceP16054 737 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cacna2d2Q6PHS9 1154 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Naa15Q80UM3 865 aaKnown RBP11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Olfr395Q8VGR3 312 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Prpf6Q91YR7 941 aaKnown RBP11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Q9D9D9 101 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Aox1O54754 1333 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 ZbbxQ0P5X5 716 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Gm5935Q497S0 212 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Atp13a3Q5XF89 1219 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Utp14bQ6EJB6 756 aaKnown RBP11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Lrrc24Q8BHA1 521 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rrp15Q9CYX7 281 aaKnown RBP11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Col4a3bpQ9EQG9 624 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Eif4enif1Q9EST3 983 aaKnown RBP11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Dpf1Q9QX66 387 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rasal2E9PW37 1286 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Stk10O55098 966 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Map4k1P70218 827 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 PrkczQ02956 592 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Clic6Q8BHB9 596 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Med15Q924H2 789 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Mms22lB1AUR6 1238 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cnbd1B1AWM0 430 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Igfbp6P47880 238 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 RalaP63321 206 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Dclk2Q6PGN3 756 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Csgalnact2Q8C1F4 542 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Rpa3Q9CQ71 121 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Capn9Q9D805 690 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Usp32F8VPZ3 1604 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Cdk5rap2Q8K389 1822 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Krt78E9Q0F0 1068 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Acvr2bP27040 536 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Nr2f2P43135 414 aa11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 CtcfQ61164 736 aaKnown RBP11.5□□□□□ -0.57
Limch1-201ENSMUST00000038188 Znf532Q6NXK2 1036 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms