RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Znf445Q8R2V3 986 aa12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Ppp2r2dQ925E7 453 aa12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Mmtag2Q99LX5 260 aaKnown RBP12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Mrps25Q9D125 171 aaKnown RBP12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 PalmdQ9JHU2 551 aa12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Stx6Q9JKK1 255 aa12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Hic2Q9JLZ6 619 aaKnown RBP12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 LctF8VPT3 1931 aa12.8□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Tbkbp1A2A9T0 611 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Ankrd16A2AS55 361 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Gm3383J3QQ59 259 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 PrkceP16054 737 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Tap2P36371 702 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Lman2lP59481 347 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Casp7P97864 303 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Lrrc55Q3UY51 311 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Slc9a2Q3ZAS0 814 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Cyp7b1Q60991 507 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Epha7Q61772 998 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Tgoln2Q62314 363 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Gpbp1l1Q6NZP2 473 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 N4bp3Q8C7U1 537 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Dmtf1Q8CE22 761 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Etv3Q8R4Z4 513 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Lmcd1Q8VEE1 365 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Olfr397Q8VEZ6 315 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Pcdhb12Q91Y07 789 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Six6os1Q9CTN5 574 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Ccdc88cQ6VGS5 2009 aa12.79□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Kif26aQ52KG5 1881 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Zscan4-ps1A0A1C7CYV3 506 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Gm5134E9QAB5 671 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Kpna6O35345 536 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Grin1P35438 938 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Ccdc66Q6NS45 935 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 St18Q80TY4 1045 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Sestd1Q80UK0 696 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Cdca8Q8BHX3 289 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Fbxo44Q8BK26 255 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 NcaphQ8C156 731 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Tbc1d13Q8R3D1 400 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Nrbp2Q91V36 499 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 FcrlaQ920A9 352 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 NptxrQ99J85 493 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 IydQ9DCX8 285 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Tmod3Q9JHJ0 352 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Clic4Q9QYB1 253 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Map2k5Q9WVS7 448 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Rad9aQ9Z0F6 389 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Abcb11Q9QY30 1321 aa12.78□□□□□ -0.36
Ccdc28b-201ENSMUST00000030586 Otud7bB2RUR8 840 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Cyp26c1B2RXA7 518 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Clk2O35491 499 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Cd70O55237 195 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Art2aP17981 287 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 PparaP23204 468 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Aldh1a1P24549 501 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 IgflQ6B9Z0 140 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Tas2r124Q7M718 309 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Bag4Q8CI61 457 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 OtoaQ8K561 1137 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 DutQ8VCG1 200 aaKnown RBP12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Prmt7Q922X9 692 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Rtfdc1Q99K95 307 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 MutyhQ99P21 515 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Adamts9E9PUN6 1931 aa12.77□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Tmem240B2RWJ3 173 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Ppm1aP49443 382 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Ccr1P51675 355 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Psmc5P62196 406 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Irf3P70671 419 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Etv6P97360 485 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Drp2Q05AA6 957 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Gpatch11Q3UFS4 262 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Gas6Q61592 674 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Fam214aQ69ZK7 1075 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Pnma1Q8C1C8 353 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Mrgprx1Q8CIP3 322 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Washc1Q8VDD8 475 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Trub2Q91WG3 331 aaKnown RBP12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Grin3bQ91ZU9 1003 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Mcoln1Q99J21 580 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 DgkeQ9R1C6 564 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Fxr2Q9WVR4 673 aaKnown RBP12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Sucla2Q9Z2I9 463 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Ktn1Q61595 1327 aaKnown RBP12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Kmt2eQ3UG20 1868 aa12.76□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Gm45015A0A140LII9 184 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Gm18336A0A140LIU8 765 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Gm6133B2RY53 190 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Obsl1D3YYU8 1804 aaKnown RBP12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Trip11E9Q512 1976 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 R3hdm1E9Q9Q2 1135 aaKnown RBP12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 2610008E11RikG3X964 669 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Pbx2O35984 430 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Clcn3P51791 818 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Gtf2f1Q3THK3 508 aaKnown RBP12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Hhla1Q3TYV2 514 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 Inppl1Q6P549 1257 aa12.75□□□□□ -0.37
Ccdc28b-201ENSMUST00000030586 IqceQ6PCQ0 778 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms