RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Hoxc10P31257 342 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mark2Q05512 776 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Slc7a1Q09143 622 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Q3U4G0 281 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Sema4bQ62179 823 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kiaa1328Q6NZK5 612 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kif11Q6P9P6 1052 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 SpidrQ8BGX7 933 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Miga2Q8BK03 593 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 MtrrQ8C1A3 696 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Rtp1Q8C8C1 263 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nox1Q8CIZ9 591 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Otud7aQ8R554 926 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Pcdha7Q91Y13 937 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nmd3Q99L48 503 aaKnown RBP12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tsnaxip1Q99P25 704 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tmed10Q9D1D4 219 aaKnown RBP12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Pramef12Q9D2F1 463 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Capn9Q9D805 690 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Vmn2r72D3Z4N8 856 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Prdm15E9Q8T2 1174 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 NumblO08919 604 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cetn3O35648 167 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gsta4P24472 222 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ugt1a2P70691 533 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Atp8b2P98199 1209 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gbp1Q01514 589 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Rgs9bpQ148R9 237 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mcm9Q2KHI9 1134 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Esyt2Q3TZZ7 845 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Hace1Q3U0D9 909 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gm5169Q5M8P2 212 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nsrp1Q5NCR9 542 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ubxn10Q8BG34 277 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 AgpsQ8C0I1 645 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Actl9Q8CG27 415 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tspyl4Q8VD63 406 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Dnajc9Q91WN1 259 aaKnown RBP12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Lrrc59Q922Q8 307 aaKnown RBP12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cdk5rap3Q99LM2 503 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Dph5Q9CWQ0 281 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ist1Q9CX00 362 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Zcrb1Q9CZ96 217 aaKnown RBP12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 PycardQ9EPB4 193 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Kat2aQ9JHD2 830 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nlrp5Q9R1M5 1163 aa12.47□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tcp11x2A2AEI7 503 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Lcn6A2AJB9 181 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Gm10479K7N6H4 105 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Casq2O09161 415 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Snx3O70492 162 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tuba1bP05213 451 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tcp1P11983 556 aaKnown RBP12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Wnt7aP24383 349 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Eef1dP57776 281 aaKnown RBP12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Map3k7clP58500 142 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tuba1aP68369 451 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Trappc10Q3TLI0 1259 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Ankrd27Q3UMR0 1048 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 E330034G19RikQ3UWX6 351 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cdc14aQ6GQT0 603 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Krit1Q6S5J6 736 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Fam161bQ8CB59 589 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Lsm14bQ8CGC4 385 aaKnown RBP12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Krtcap3Q8K177 240 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cabp7Q91ZM8 215 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Tmem39aQ9CYC3 486 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Cfap45Q9D9U9 551 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Senp3Q9EP97 568 aaKnown RBP12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Stx12Q9ER00 274 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Nup50Q9JIH2 466 aaKnown RBP12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Mzf1S4R1L6 814 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Bcl9lQ67FY2 1494 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Myh13B1AR69 1938 aa12.46□□□□□ -0.41
Trim55-201ENSMUST00000029139 Znf804aA2AKY4 1200 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 JrklB2RRL2 523 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Zfp839E9PUU5 921 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Tpp1O89023 562 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Rrm1P07742 792 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Cyp2b9P12790 491 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Msh2P43247 935 aaKnown RBP12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Cplx1P63040 134 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Cyp2c54Q6XVG2 490 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Usp40Q8BWR4 1235 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 LnpepQ8C129 1025 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Ltbp1Q8CG19 1712 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Tmem259Q8CIV2 574 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Zbtb44Q8R0A2 453 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Ubxn1Q922Y1 297 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Trim59Q922Y2 403 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Pagr1aQ99L02 253 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Efcab2Q9CQ46 164 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Neurl2Q9D0S4 285 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Sh2d4aQ9D7V1 421 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Q9DA42 136 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Cwc25Q9DBF7 416 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Tsc1Q9EP53 1161 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Trpc7Q9WVC5 862 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Hmg20bQ9Z104 317 aa12.46□□□□□ -0.42
Trim55-201ENSMUST00000029139 Zfand4D3Z3C6 739 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms