RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 E2f8Q58FA4 860 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Otub1Q7TQI3 271 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Spata4Q8K3V1 295 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ifit3bE9PV48 403 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Zfp850J3QPC5 689 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Pgrmc1O55022 195 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ric8aQ3TIR3 530 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Kdm8Q9CXT6 414 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ppp1r1bQ60829 194 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 GnptabQ69ZN6 1235 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Slc18a1Q8R090 521 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Serpinb6cW4VSP4 379 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Plbd2Q3TCN2 594 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Slc27a1Q60714 646 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 C2cd5Q7TPS5 1016 aaKnown RBP14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Def8Q99J78 448 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tomm70Q9CZW5 611 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 AacsQ9D2R0 672 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ano3A2AHL1 981 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm7942L7N277 499 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Yars2Q8BYL4 472 aaKnown RBP14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 NclnQ8VCM8 563 aaKnown RBP14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Cnksr1A2A9K7 700 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 CrklP47941 303 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Arhgap26Q6ZQ82 814 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ripor2Q80U16 1078 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Rfx6Q8C7R7 927 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ptk2bQ9QVP9 1009 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Slc39a6Q8C145 765 aa14.92□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Slc4a9E9PUP3 929 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ccdc144bE9PVZ3 520 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Spata18Q0P557 537 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Mapre1Q61166 268 aaKnown RBP14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ranbp17Q99NF8 1088 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Krt87Q6IMF0 495 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Bzw1Q9CQC6 419 aaKnown RBP14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ccdc130Q9D516 385 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ppp1r2Q9DCL8 206 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Cul3Q9JLV5 768 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 3425401B19RikD3Z1D3 1412 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Prrc2bQ7TPM1 1486 aaKnown RBP14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 TpbpaP13438 124 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Uhmk1P97343 419 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Aifm3Q3TY86 605 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Smg5Q6ZPY2 1017 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Zc3h6Q8BYK8 1177 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tp53bp2Q8CG79 1128 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Taf11Q99JX1 211 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Nme8Q715T0 586 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ankk1Q8BZ25 745 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 CntrobQ8CB62 887 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Atad2Q8CDM1 1040 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Snx30Q8CE50 437 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm20721E9Q2U8 318 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gad1P48318 593 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Dpp7Q9ET22 506 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Apobec2Q9WV35 224 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Map3k19E9Q3S4 1311 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Syngap1F6SEU4 1340 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm4841E9QAA8 417 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Serpind1P49182 478 aa14.91□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Trim15G3UY57 292 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Il15P48346 162 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Pcif1P59114 706 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tmem232Q5K6N0 675 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tom1l2Q5SRX1 507 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Clic4Q9QYB1 253 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Csn1s1P19228 313 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Dhx30Q99PU8 1217 aaKnown RBP14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Erap1Q9EQH2 930 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Hspd1P63038 573 aaKnown RBP14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Heatr3Q8BQM4 679 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Rcor2Q8C796 523 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Edc3Q8K2D3 508 aaKnown RBP14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm8879F6R3J9 157 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Vmn2r68L7N2B3 851 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 S100a6P14069 89 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 RasefQ5RI75 627 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Tpp2Q64514 1262 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Panx2Q6IMP4 677 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ephb1Q8CBF3 984 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Gm11549A0A286YD83 63 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 1700113H08RikE9Q9Q5 327 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Vwa3bJ9JI28 736 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Klc2O88448 599 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Sfr1Q8BP27 319 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Wdr24Q8CFJ9 790 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Akr1b7P21300 316 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 MagohP61327 146 aaKnown RBP14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Zc3h4Q6ZPZ3 1304 aaKnown RBP14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Clic6Q8BHB9 596 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 MagohbQ9CQL1 146 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Dbndd1Q9CZ00 160 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Ifi35Q9D8C4 286 aa14.9□□□□□ -0.02
Col5a1-201ENSMUST00000028280 Uggt2E9Q4X2 1504 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 L3mbtl1A2A5N8 826 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Pcdha4O88689 947 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 Prl3b1P09586 222 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 GckP52792 465 aa14.89□□□□□ -0.03
Col5a1-201ENSMUST00000028280 DSCC1Q14AI0 399 aa14.89□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms