RNA–Protein interactions for RNA: ENSMUST00000020441.12

Vps13d-201, Transcript of Vacuolar protein sorting 13D, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Vps13d, Length 15,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13d-201ENSMUST00000020441 ArhgdiaQ99PT1 204 aaKnown RBP5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Extl3Q9WVL6 918 aa5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Gm1758F6VZZ1 202 aa5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Tcp11Q01755 566 aa5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Letm2Q7TNU7 480 aa5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 E4f1Q8CCE9 783 aa5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 UvragQ8K245 698 aa5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 BrdtQ91Y44 956 aa5.95□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Erbb3Q61526 1339 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Krt24A1L317 512 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Cyp11b1Q3TG86 501 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Map3k7Q62073 579 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Haus7Q8BKT8 364 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Mta1Q8K4B0 715 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Zranb2Q9R020 330 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Cog1Q9Z160 980 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 GckP52792 465 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Stx2Q00262 289 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 GartQ64737 1010 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Ddah1Q9CWS0 285 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Gm28043E0CXC2 719 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Krt1P04104 637 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Dhx37Q6NZL1 1150 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Atp6v0d2Q80SY3 350 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Fermt3Q8K1B8 665 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Vmn1r199Q8R280 367 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 HnrnprQ8VHM5 632 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Map3k20Q9ESL4 802 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Ccdc22Q9JIG7 627 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Tmem2Q5FWI3 1383 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Fyb2A2A995 729 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Cpsf2O35218 782 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Nsun2Q1HFZ0 757 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Usp44Q8C2S0 711 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Kiaa0391Q8JZY4 584 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Cdk8Q8R3L8 464 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Q9CYI0 393 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 NxnP97346 435 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Afg3l2Q8JZQ2 802 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Vps39Q8R5L3 886 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Osbpl1aQ91XL9 950 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Gadd45gQ9Z111 159 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 1700011I03RikE9PYL8 271 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Krt4P07744 525 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 ZfaP23607 742 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Tex11Q14AT2 947 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Mettl17Q3U2U7 461 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Rab3ipQ68EF0 428 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 RgmbQ7TQ33 436 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Bud13Q8R149 637 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Akt3Q9WUA6 479 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Prdm2A2A7B5 1709 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Rgs12Q8CGE9 1381 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Gm45194A0A140LJG2 572 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Ugt1a5B2RT14 529 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Inpp1P49442 396 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Rbm15bQ6PHZ5 887 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Gtf3c4Q8BMQ2 817 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Suds3Q8BR65 328 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Mccc1Q99MR8 717 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Dnajc12Q9R022 198 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Efna5O08543 228 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 EsrraO08580 422 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 YwhagP61982 247 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Sparcl1P70663 650 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Rbm46P86049 533 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Vps41Q5KU39 853 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Krt39Q6IFX4 482 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Ccdc182Q9D9C6 152 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Mbd5B1AYB6 1498 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 PbsnO08976 174 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Krt10P02535 570 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Tubgcp3P58854 905 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Ddx3yQ62095 658 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Nlrp4eQ66X19 978 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Acap3Q6NXL5 833 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Lig4Q8BTF7 911 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Dpp9Q8BVG4 862 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Nkiras1Q8CEC5 192 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Zbtb18Q9WUK6 522 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Psmd10Q9Z2X2 231 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Eme2Q56A04 373 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Slc12a8Q8VI23 705 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 FancfE9Q5Z5 343 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Miga1Q4QQM5 600 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Bcap29Q61334 240 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Stxbp5Q8K400 1152 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Mfap3lQ9D3X9 409 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Fthl17aQ9DAX0 182 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Zfyve16Q80U44 1528 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Adprhl2Q8CG72 370 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Nol6Q8R5K4 1152 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 MlphQ91V27 590 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 NonoQ99K48 473 aaKnown RBP5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 SynrgQ5SV85 1306 aa5.94□□□□□ -1.46
Vps13d-201ENSMUST00000020441 ClgnP52194 611 aa5.93□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Atp8a1P70704 1164 aa5.93□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Gbp4A4UUI3 631 aa5.93□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Actn3O88990 900 aaKnown RBP5.93□□□□□ -1.46
Vps13d-201ENSMUST00000020441 Akap4Q60662 849 aa5.93□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms