RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Cdk9Q99J95 372 aa19.34■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Kremen1Q99N43 473 aa19.34■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Golga1Q9CW79 758 aa19.34■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Rasgef1cQ9D300 466 aa19.34■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 EmcnQ9R0H2 261 aa19.34■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Znfx1Q8R151 1909 aaKnown RBP19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 CflarO35732 481 aa19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Oprl1P35377 367 aa19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 SpertQ32MG2 446 aa19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Rap1gap2Q5SVL6 712 aaKnown RBP19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Dennd1aQ8K382 1016 aa19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Mad2l2Q9D752 211 aa19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Gtf2h1Q9DBA9 547 aa19.33■□□□□ 0.69
Sqstm1-201ENSMUST00000015981 Atp2a2O55143 1044 aaKnown RBP19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 SfswapQ3USH5 945 aaKnown RBP19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gm5935Q497S0 212 aa19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 PRAG1Q571I4 1179 aa19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Rgl2Q61193 778 aa19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Sin3bQ62141 1098 aa19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Susd4Q8BH32 490 aa19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Psmd2Q8VDM4 908 aa19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Irs4Q9Z0Y7 1216 aa19.33■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gm6121L7MUF1 212 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Atp6v0a2P15920 856 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Hps5P59438 1126 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ppp1r21Q3TDD9 780 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 StilQ60988 1262 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Slc39a11Q8BWY7 342 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Csgalnact2Q8C1F4 542 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Dtnbp1Q91WZ8 352 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 ParvgQ9ERD8 331 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pacsin2Q9WVE8 486 aaKnown RBP19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Nup62clA2AG10 272 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 1700029H14RikE9PY36 240 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Mapkapk5O54992 473 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Xrcc6P23475 608 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 M6prP24668 278 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Dnajc5P60904 198 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Krt35Q497I4 455 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Chn1Q91V57 459 aa19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ftsj3Q9DBE9 838 aaKnown RBP19.32■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Zfyve9A2A8R0 1397 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Dock5B2RY04 1868 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gm7356A0A087WSA6 508 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Trip13Q3UA06 432 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Fhdc1Q3ULZ2 1149 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Cyb5d1Q5NCY3 228 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Kcnj11Q61743 390 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Foxo6Q70KY4 559 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 R3hdm2Q80TM6 1044 aaKnown RBP19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Acbd3Q8BMP6 525 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 AgpsQ8C0I1 645 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Mphosph6Q9D1Q1 161 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Cep72Q9D3R3 646 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Popdc2Q9ES82 367 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Dpcr1Q3TNW5 500 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Klra5Q60652 266 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Arhgef19Q8BWA8 802 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 NcaldQ91X97 193 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pdxdc1Q99K01 787 aaKnown RBP19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Gpatch1Q9DBM1 930 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Slc12a7Q9WVL3 1083 aa19.31■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 NesQ6P5H2 1864 aaKnown RBP19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pgrmc1O55022 195 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Serpinc1P32261 465 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Nr2e1Q64104 385 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 March6Q6ZQ89 909 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ccdc25Q78PG9 208 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Actn1Q7TPR4 892 aaKnown RBP19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Shtn1Q8K2Q9 631 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 AdpgkQ8VDL4 496 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Txnrd1Q9JMH6 613 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 A0A286YCQ6 122 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Akr1b1P45376 316 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 GckP52792 465 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Agxt2Q3UEG6 513 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Syne3Q4FZC9 975 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 GanQ8CA72 597 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 AagabQ8R2R3 316 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Znf445Q8R2V3 986 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Rpa1Q8VEE4 623 aaKnown RBP19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Lpin2Q99PI5 893 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Kif17Q99PW8 1038 aa19.3■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ccdc78D3Z5T1 437 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Zfp408H7BX78 710 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ctnnal1O88327 731 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ephb2P54763 986 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Wfs1P56695 890 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Aak1Q3UHJ0 959 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Tnni3kQ5GIG6 834 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Uts2bQ765I1 113 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Calml4Q91WQ9 153 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 CoasyQ9DBL7 563 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Pabpc1lA2A5N3 607 aaKnown RBP19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Ankrd63A2ARS0 390 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 CidebO70303 219 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Polr2fP61219 127 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Lrch1P62046 709 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Tmed8Q3UHI4 326 aa19.29■□□□□ 0.68
Sqstm1-201ENSMUST00000015981 Rexo1Q7TT28 1213 aa19.29■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms