RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W GPN2Q08726 347 aaPredicted RBP3.65□□□□□ -1.83
ROD1YOR018W UAF30Q08747 228 aa3.65□□□□□ -1.83
ROD1YOR018W YOR342CQ12182 319 aa3.65□□□□□ -1.83
ROD1YOR018W STT4P37297 1900 aa3.65□□□□□ -1.83
ROD1YOR018W TOR1P35169 2470 aa3.64□□□□□ -1.83
ROD1YOR018W THP2O13539 261 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W SUI3P09064 285 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W RNA1P11745 407 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W DAP2P18962 818 aa3.64□□□□□ -1.83
ROD1YOR018W URE2P23202 354 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W CDC5P32562 705 aa3.64□□□□□ -1.83
ROD1YOR018W SFC1P33303 322 aa3.64□□□□□ -1.83
ROD1YOR018W DOM34P33309 386 aa3.64□□□□□ -1.83
ROD1YOR018W LHP1P33399 275 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W SKG1P36169 355 aa3.64□□□□□ -1.83
ROD1YOR018W YCR087C-AP37263 153 aa3.64□□□□□ -1.83
ROD1YOR018W YBR071WP38243 211 aa3.64□□□□□ -1.83
ROD1YOR018W YHR218WP38899 603 aa3.64□□□□□ -1.83
ROD1YOR018W BEM4P39011 633 aa3.64□□□□□ -1.83
ROD1YOR018W PAC11P40960 533 aa3.64□□□□□ -1.83
ROD1YOR018W SEC26P41810 973 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W ALK1P43633 760 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W STE24P47154 453 aa3.64□□□□□ -1.83
ROD1YOR018W DIA3P52290 468 aa3.64□□□□□ -1.83
ROD1YOR018W YMR099CQ03161 297 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W STP3Q05937 343 aa3.64□□□□□ -1.83
ROD1YOR018W VPS74Q06385 345 aa3.64□□□□□ -1.83
ROD1YOR018W GPI11Q06636 219 aa3.64□□□□□ -1.83
ROD1YOR018W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
ROD1YOR018W NTG2Q08214 380 aa3.64□□□□□ -1.83
ROD1YOR018W REX4Q08237 289 aa3.64□□□□□ -1.83
ROD1YOR018W MMT2Q08970 484 aa3.64□□□□□ -1.83
ROD1YOR018W ALG6Q12001 544 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W HBN1Q96VH4 193 aa3.64□□□□□ -1.83
ROD1YOR018W RPS9AO13516 197 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W GCD2P12754 651 aaPredicted RBP3.64□□□□□ -1.83
ROD1YOR018W SNF4P12904 322 aa3.64□□□□□ -1.83
ROD1YOR018W RSR1P13856 272 aa3.64□□□□□ -1.83
ROD1YOR018W HOP1P20050 605 aa3.64□□□□□ -1.83
ROD1YOR018W SPB1P25582 841 aaPredicted RBP3.64□□□□□ -1.83
ROD1YOR018W TFC1P32367 649 aa3.64□□□□□ -1.83
ROD1YOR018W CAT2P32796 670 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W SPO23P33757 523 aa3.64□□□□□ -1.83
ROD1YOR018W YKL151CP36059 337 aa3.64□□□□□ -1.83
ROD1YOR018W BNA4P38169 460 aa3.64□□□□□ -1.83
ROD1YOR018W GIC1P38785 314 aa3.64□□□□□ -1.83
ROD1YOR018W RIC1P40395 1056 aa3.64□□□□□ -1.83
ROD1YOR018W IAH1P41734 238 aa3.64□□□□□ -1.83
ROD1YOR018W PRM10P42946 383 aa3.64□□□□□ -1.83
ROD1YOR018W RAD17P48581 401 aa3.64□□□□□ -1.83
ROD1YOR018W CCE1Q03702 353 aa3.64□□□□□ -1.83
ROD1YOR018W HFD1Q04458 532 aa3.64□□□□□ -1.83
ROD1YOR018W DTD1Q07648 150 aaKnown RBP3.64□□□□□ -1.83
ROD1YOR018W THI73Q07904 523 aa3.64□□□□□ -1.83
ROD1YOR018W NSL1Q12143 216 aa3.64□□□□□ -1.83
ROD1YOR018W ATG34Q12292 412 aa3.64□□□□□ -1.83
ROD1YOR018W RAP1P11938 827 aa3.63□□□□□ -1.83
ROD1YOR018W MRP13P12686 339 aa3.63□□□□□ -1.83
ROD1YOR018W YCK1P23291 538 aa3.63□□□□□ -1.83
ROD1YOR018W ADE1P27616 306 aa3.63□□□□□ -1.83
ROD1YOR018W ARP2P32381 391 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W ERG1P32476 496 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W SFA1P32771 386 aa3.63□□□□□ -1.83
ROD1YOR018W PTR2P32901 601 aa3.63□□□□□ -1.83
ROD1YOR018W TUL1P36096 758 aa3.63□□□□□ -1.83
ROD1YOR018W AUR1P36107 401 aaPredicted RBP3.63□□□□□ -1.83
ROD1YOR018W MRPL37P36532 105 aa3.63□□□□□ -1.83
ROD1YOR018W EHT1P38295 451 aa3.63□□□□□ -1.83
ROD1YOR018W ELO1P39540 310 aa3.63□□□□□ -1.83
ROD1YOR018W FMP52P40008 231 aa3.63□□□□□ -1.83
ROD1YOR018W LEM3P42838 414 aa3.63□□□□□ -1.83
ROD1YOR018W FMP33P46998 180 aa3.63□□□□□ -1.83
ROD1YOR018W BNA3P47039 444 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W ILM1P47155 203 aa3.63□□□□□ -1.83
ROD1YOR018W MTQ2Q03920 221 aaPredicted RBP3.63□□□□□ -1.83
ROD1YOR018W GMC2Q06201 188 aa3.63□□□□□ -1.83
ROD1YOR018W YLR036CQ07986 203 aa3.63□□□□□ -1.83
ROD1YOR018W YLR126CQ12288 251 aa3.63□□□□□ -1.83
ROD1YOR018W PSY3Q12318 242 aa3.63□□□□□ -1.83
ROD1YOR018W NHA1Q99271 985 aa3.63□□□□□ -1.83
ROD1YOR018W RAD7P06779 565 aa3.63□□□□□ -1.83
ROD1YOR018W RHO1P06780 209 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W VPS33P20795 691 aa3.63□□□□□ -1.83
ROD1YOR018W MSB1P21339 1137 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W SLM5P25345 492 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W CSM1P25651 190 aa3.63□□□□□ -1.83
ROD1YOR018W UBC8P28263 218 aa3.63□□□□□ -1.83
ROD1YOR018W YIM1P28625 365 aa3.63□□□□□ -1.83
ROD1YOR018W PEX3P28795 441 aa3.63□□□□□ -1.83
ROD1YOR018W CDC13P32797 924 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W YKL107WP34251 309 aa3.63□□□□□ -1.83
ROD1YOR018W PCF11P39081 626 aaPredicted RBP3.63□□□□□ -1.83
ROD1YOR018W MPM1P40364 252 aa3.63□□□□□ -1.83
ROD1YOR018W DIM1P41819 318 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W YJL043WP47053 257 aa3.63□□□□□ -1.83
ROD1YOR018W YGR045CP53229 120 aa3.63□□□□□ -1.83
ROD1YOR018W NMD4Q12129 218 aa3.63□□□□□ -1.83
ROD1YOR018W NTO1Q12311 748 aa3.63□□□□□ -1.83
ROD1YOR018W WTM1Q12363 437 aaKnown RBP3.63□□□□□ -1.83
ROD1YOR018W YPR096CO13587 100 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms