RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C MCM22P47167 239 aa7.06□□□□□ -1.28
AFG2YLR397C COS12P53053 380 aa7.06□□□□□ -1.28
AFG2YLR397C RRT6P53117 311 aaPredicted RBP7.06□□□□□ -1.28
AFG2YLR397C CWC27Q02770 301 aa7.06□□□□□ -1.28
AFG2YLR397C RTN1Q04947 295 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C HDA2Q06629 674 aa7.06□□□□□ -1.28
AFG2YLR397C LDB19Q12502 818 aa7.06□□□□□ -1.28
AFG2YLR397C PNO1Q99216 274 aaKnown RBP7.06□□□□□ -1.28
AFG2YLR397C CDC28P00546 298 aaKnown RBP7.05□□□□□ -1.28
AFG2YLR397C GUT1P32190 709 aa7.05□□□□□ -1.28
AFG2YLR397C SDH3P33421 198 aa7.05□□□□□ -1.28
AFG2YLR397C HIS7P33734 552 aaKnown RBP7.05□□□□□ -1.28
AFG2YLR397C YBR259WP38338 688 aa7.05□□□□□ -1.28
AFG2YLR397C COS8P38723 381 aa7.05□□□□□ -1.28
AFG2YLR397C NSG1P38837 291 aa7.05□□□□□ -1.28
AFG2YLR397C BST1P43571 1029 aa7.05□□□□□ -1.28
AFG2YLR397C ART5P53244 586 aaKnown RBP7.05□□□□□ -1.28
AFG2YLR397C MTQ1P53944 314 aa7.05□□□□□ -1.28
AFG2YLR397C IDP3P53982 420 aaKnown RBP7.05□□□□□ -1.28
AFG2YLR397C HXT11P54862 567 aa7.05□□□□□ -1.28
AFG2YLR397C IZH3Q07959 543 aa7.05□□□□□ -1.28
AFG2YLR397C YGK3Q12222 375 aaPredicted RBP7.05□□□□□ -1.28
AFG2YLR397C TRP4P07285 380 aaPredicted RBP7.05□□□□□ -1.28
AFG2YLR397C MTF1P14908 341 aaKnown RBP7.05□□□□□ -1.28
AFG2YLR397C SPC34P36131 295 aa7.05□□□□□ -1.28
AFG2YLR397C TCM62P38228 572 aaKnown RBP7.05□□□□□ -1.28
AFG2YLR397C ERV15P38312 142 aa7.05□□□□□ -1.28
AFG2YLR397C NPP2P39997 493 aa7.05□□□□□ -1.28
AFG2YLR397C RGD2P43556 714 aa7.05□□□□□ -1.28
AFG2YLR397C YNL010WP53981 241 aaKnown RBP7.05□□□□□ -1.28
AFG2YLR397C REG1Q00816 1014 aa7.05□□□□□ -1.28
AFG2YLR397C YPL071CQ02864 156 aa7.05□□□□□ -1.28
AFG2YLR397C YPL108WQ02872 168 aaPredicted RBP7.05□□□□□ -1.28
AFG2YLR397C YPL107WQ02873 248 aa7.05□□□□□ -1.28
AFG2YLR397C SNO1Q03144 224 aa7.05□□□□□ -1.28
AFG2YLR397C PML39Q03760 334 aa7.05□□□□□ -1.28
AFG2YLR397C YDR109CQ04585 715 aa7.05□□□□□ -1.28
AFG2YLR397C SYT1Q06836 1226 aa7.05□□□□□ -1.28
AFG2YLR397C HFI1Q12060 488 aa7.05□□□□□ -1.28
AFG2YLR397C FRT1Q99332 602 aa7.05□□□□□ -1.28
AFG2YLR397C BCY1P07278 416 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C MOD5P07884 428 aa7.04□□□□□ -1.28
AFG2YLR397C PPZ1P26570 692 aa7.04□□□□□ -1.28
AFG2YLR397C DEG1P31115 442 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C NAB2P32505 525 aaKnown RBP RIP-Chip data7.04□□□□□ -1.28not detected
AFG2YLR397C YKR051WP36142 418 aa7.04□□□□□ -1.28
AFG2YLR397C YKR075CP36155 307 aa7.04□□□□□ -1.28
AFG2YLR397C POA1P38218 177 aa7.04□□□□□ -1.28
AFG2YLR397C NEO1P40527 1151 aa7.04□□□□□ -1.28
AFG2YLR397C PEX25Q02969 394 aa7.04□□□□□ -1.28
AFG2YLR397C RLI1Q03195 608 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C YDL199CQ12407 687 aa7.04□□□□□ -1.28
AFG2YLR397C CET1O13297 549 aaPredicted RBP7.04□□□□□ -1.28
AFG2YLR397C HTB1P02293 131 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C HTB2P02294 131 aa7.04□□□□□ -1.28
AFG2YLR397C RPC40P07703 335 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C GCD1P09032 578 aaPredicted RBP7.04□□□□□ -1.28
AFG2YLR397C IMA3P0CW40 589 aa7.04□□□□□ -1.28
AFG2YLR397C IMA4P0CW41 589 aa7.04□□□□□ -1.28
AFG2YLR397C REV1P12689 985 aa7.04□□□□□ -1.28
AFG2YLR397C RFA1P22336 621 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C RNA15P25299 296 aaPredicted RBP7.04□□□□□ -1.28
AFG2YLR397C DBF4P32325 704 aa7.04□□□□□ -1.28
AFG2YLR397C PDC2P32896 925 aa7.04□□□□□ -1.28
AFG2YLR397C FRE2P36033 711 aa7.04□□□□□ -1.28
AFG2YLR397C TUL1P36096 758 aa7.04□□□□□ -1.28
AFG2YLR397C SHM2P37291 469 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C RSP5P39940 809 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C ALK1P43633 760 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C SOK2P53438 785 aaPredicted RBP7.04□□□□□ -1.28
AFG2YLR397C HHO1P53551 258 aa7.04□□□□□ -1.28
AFG2YLR397C SLM2P53955 656 aa7.04□□□□□ -1.28
AFG2YLR397C NUP49Q02199 472 aa7.04□□□□□ -1.28
AFG2YLR397C MDM30Q05930 598 aa7.04□□□□□ -1.28
AFG2YLR397C YLR179CQ06252 201 aaKnown RBP7.04□□□□□ -1.28
AFG2YLR397C ARO10Q06408 635 aa7.04□□□□□ -1.28
AFG2YLR397C IMA2Q08295 589 aa7.04□□□□□ -1.28
AFG2YLR397C SLD7Q08457 257 aa7.04□□□□□ -1.28
AFG2YLR397C RAD28Q12021 506 aa7.04□□□□□ -1.28
AFG2YLR397C TGS1Q12052 315 aa7.04□□□□□ -1.28
AFG2YLR397C SPC3Q12133 184 aa7.04□□□□□ -1.28
AFG2YLR397C FYV7Q12247 151 aa7.04□□□□□ -1.28
AFG2YLR397C COS2P0CX12 379 aa7.03□□□□□ -1.28
AFG2YLR397C COS3P0CX13 379 aa7.03□□□□□ -1.28
AFG2YLR397C CAF20P12962 161 aaKnown RBP7.03□□□□□ -1.28
AFG2YLR397C NAR1P23503 491 aaKnown RBP7.03□□□□□ -1.28
AFG2YLR397C CYS3P31373 394 aaKnown RBP7.03□□□□□ -1.28
AFG2YLR397C NTH1P32356 751 aa7.03□□□□□ -1.28
AFG2YLR397C AIM29P36154 155 aa7.03□□□□□ -1.28
AFG2YLR397C MRPL36P36531 177 aa7.03□□□□□ -1.28
AFG2YLR397C PAN5P38787 379 aa7.03□□□□□ -1.28
AFG2YLR397C IPT1P38954 527 aa7.03□□□□□ -1.28
AFG2YLR397C POP2P39008 433 aa7.03□□□□□ -1.28
AFG2YLR397C MOG1P47123 218 aa7.03□□□□□ -1.28
AFG2YLR397C MRPL22P53881 309 aa7.03□□□□□ -1.28
AFG2YLR397C RPL22BP56628 122 aaKnown RBP7.03□□□□□ -1.28
AFG2YLR397C OYE2Q03558 400 aaKnown RBP7.03□□□□□ -1.28
AFG2YLR397C RIB3Q99258 208 aa7.03□□□□□ -1.28
AFG2YLR397C AFT1P22149 690 aa7.02□□□□□ -1.28
AFG2YLR397C SRB6P32570 121 aa7.02□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 626.6 ms