RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C MSK1P32048 576 aa3.81□□□□□ -1.8
SPB4YFL002C SPC34P36131 295 aa3.81□□□□□ -1.8
SPB4YFL002C SNL1P40548 159 aa3.81□□□□□ -1.8
SPB4YFL002C GCD14P46959 383 aaPredicted RBP3.81□□□□□ -1.8
SPB4YFL002C HMS2P47175 358 aa3.81□□□□□ -1.8
SPB4YFL002C PMT5P52867 743 aa3.81□□□□□ -1.8
SPB4YFL002C RET3P53600 189 aa3.81□□□□□ -1.8
SPB4YFL002C MPS1P54199 764 aa3.81□□□□□ -1.8
SPB4YFL002C MMT1Q03218 510 aa3.81□□□□□ -1.8
SPB4YFL002C ARR1Q06596 294 aa3.81□□□□□ -1.8
SPB4YFL002C SKI7Q08491 747 aaPredicted RBP3.81□□□□□ -1.8
SPB4YFL002C OPI3P05375 206 aa3.81□□□□□ -1.8
SPB4YFL002C EXO70P19658 623 aa3.81□□□□□ -1.8
SPB4YFL002C SKN1P33336 771 aa3.81□□□□□ -1.8
SPB4YFL002C YKL070WP36087 169 aa3.81□□□□□ -1.8
SPB4YFL002C RIM2P38127 377 aa3.81□□□□□ -1.8
SPB4YFL002C BZZ1P38822 633 aa3.81□□□□□ -1.8
SPB4YFL002C PEX18P38855 283 aa3.81□□□□□ -1.8
SPB4YFL002C ISC1P40015 477 aaKnown RBP3.81□□□□□ -1.8
SPB4YFL002C ATM1P40416 690 aa3.81□□□□□ -1.8
SPB4YFL002C IAH1P41734 238 aa3.81□□□□□ -1.8
SPB4YFL002C GTO1P48239 356 aa3.81□□□□□ -1.8
SPB4YFL002C RIB4P50861 169 aaPredicted RBP3.81□□□□□ -1.8
SPB4YFL002C YIP1P53039 248 aa3.81□□□□□ -1.8
SPB4YFL002C VOA1P53262 265 aa3.81□□□□□ -1.8
SPB4YFL002C DBP6P53734 629 aaKnown RBP3.81□□□□□ -1.8
SPB4YFL002C PNG1Q02890 363 aa3.81□□□□□ -1.8
SPB4YFL002C ERV41Q04651 352 aa3.81□□□□□ -1.8
SPB4YFL002C VAC14Q06708 880 aa3.81□□□□□ -1.8
SPB4YFL002C NRT1Q08485 598 aa3.81□□□□□ -1.8
SPB4YFL002C GEP3Q08622 556 aa3.81□□□□□ -1.8
SPB4YFL002C YDR262WQ12331 272 aa3.81□□□□□ -1.8
SPB4YFL002C ORT1Q12375 292 aa3.81□□□□□ -1.8
SPB4YFL002C SAR1P20606 190 aaKnown RBP3.8□□□□□ -1.8
SPB4YFL002C SLM5P25345 492 aaKnown RBP3.8□□□□□ -1.8
SPB4YFL002C PDR3P33200 976 aa3.8□□□□□ -1.8
SPB4YFL002C LYS1P38998 373 aaRIP-Chip data3.8□□□□□ -1.8not detected
SPB4YFL002C PRP39P39682 629 aaKnown RBP3.8□□□□□ -1.8
SPB4YFL002C RTS2P40962 232 aa3.8□□□□□ -1.8
SPB4YFL002C YPT11P48559 417 aa3.8□□□□□ -1.8
SPB4YFL002C ECI1Q05871 280 aa3.8□□□□□ -1.8
SPB4YFL002C RRG8Q06109 277 aa3.8□□□□□ -1.8
SPB4YFL002C GLE1Q12315 538 aa3.8□□□□□ -1.8
SPB4YFL002C AIM45Q12480 344 aaKnown RBP3.8□□□□□ -1.8
SPB4YFL002C DCP1Q12517 231 aaPredicted RBP3.8□□□□□ -1.8
SPB4YFL002C ARF1P11076 181 aaKnown RBP3.79□□□□□ -1.8
SPB4YFL002C AMD1P15274 810 aaKnown RBP3.79□□□□□ -1.8
SPB4YFL002C MSS116P15424 664 aaKnown RBP3.79□□□□□ -1.8
SPB4YFL002C ACH1P32316 526 aa3.79□□□□□ -1.8
SPB4YFL002C FRE1P32791 686 aa3.79□□□□□ -1.8
SPB4YFL002C SNO3P43544 222 aa3.79□□□□□ -1.8
SPB4YFL002C STE24P47154 453 aa3.79□□□□□ -1.8
SPB4YFL002C YNL181WP53878 407 aa3.79□□□□□ -1.8
SPB4YFL002C RSC9Q03124 581 aa3.79□□□□□ -1.8
SPB4YFL002C MSS11Q03825 758 aa3.79□□□□□ -1.8
SPB4YFL002C SYO1Q07395 620 aa3.79□□□□□ -1.8
SPB4YFL002C SSA3P09435 649 aaKnown RBP3.79□□□□□ -1.8
SPB4YFL002C RNA1P11745 407 aaKnown RBP3.79□□□□□ -1.8
SPB4YFL002C DBR1P24309 405 aaKnown RBP3.79□□□□□ -1.8
SPB4YFL002C MGR1P25573 417 aa3.79□□□□□ -1.8
SPB4YFL002C COY1P34237 679 aa3.79□□□□□ -1.8
SPB4YFL002C MRPL37P36532 105 aa3.79□□□□□ -1.8
SPB4YFL002C YCR041WP37265 110 aa3.79□□□□□ -1.8
SPB4YFL002C HSM3P38348 480 aa3.79□□□□□ -1.8
SPB4YFL002C BFR1P38934 470 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8 RIP-Chip
SPB4YFL002C LCP5P40079 357 aaPredicted RBP3.79□□□□□ -1.8
SPB4YFL002C CFD1P40558 293 aa3.79□□□□□ -1.8
SPB4YFL002C GAT1P43574 510 aa3.79□□□□□ -1.8
SPB4YFL002C RSN1Q03516 953 aa3.79□□□□□ -1.8
SPB4YFL002C APC4Q04601 652 aa3.79□□□□□ -1.8
SPB4YFL002C ORM2Q06144 216 aa3.79□□□□□ -1.8
SPB4YFL002C SGT1Q08446 395 aa3.79□□□□□ -1.8
SPB4YFL002C LDB17Q12342 491 aa3.79□□□□□ -1.8
SPB4YFL002C SPO24Q3E752 67 aa3.79□□□□□ -1.8
SPB4YFL002C FSH3Q99369 266 aa3.79□□□□□ -1.8
SPB4YFL002C YLL053CP0CD98 152 aa3.78□□□□□ -1.8
SPB4YFL002C PRP16P15938 1071 aaPredicted RBP3.78□□□□□ -1.8
SPB4YFL002C MEK1P24719 497 aaPredicted RBP3.78□□□□□ -1.8
SPB4YFL002C LSB5P25369 354 aa3.78□□□□□ -1.8
SPB4YFL002C ILV6P25605 309 aaKnown RBP3.78□□□□□ -1.8
SPB4YFL002C YPS1P32329 569 aa3.78□□□□□ -1.8
SPB4YFL002C RPT5P33297 434 aaKnown RBP3.78□□□□□ -1.8
SPB4YFL002C ECM15P35195 104 aa3.78□□□□□ -1.8
SPB4YFL002C FRE2P36033 711 aa3.78□□□□□ -1.8
SPB4YFL002C MMF1P40185 145 aaKnown RBP3.78□□□□□ -1.8
SPB4YFL002C CDC40P40968 455 aaPredicted RBP3.78□□□□□ -1.8
SPB4YFL002C QRI1P43123 477 aaKnown RBP3.78□□□□□ -1.8
SPB4YFL002C EMC2P47133 292 aaKnown RBP3.78□□□□□ -1.8
SPB4YFL002C PHB2P50085 310 aa3.78□□□□□ -1.8
SPB4YFL002C YGL185CP53100 379 aa3.78□□□□□ -1.8
SPB4YFL002C MND1P53102 219 aa3.78□□□□□ -1.8
SPB4YFL002C MPP6P53725 186 aaPredicted RBP3.78□□□□□ -1.8
SPB4YFL002C FRE4P53746 719 aa3.78□□□□□ -1.8
SPB4YFL002C IRC15Q02733 499 aa3.78□□□□□ -1.8
SPB4YFL002C TLG1Q03322 224 aa3.78□□□□□ -1.8
SPB4YFL002C CWC21Q03375 135 aaKnown RBP3.78□□□□□ -1.8
SPB4YFL002C MRPL51Q06090 140 aaPredicted RBP3.78□□□□□ -1.8
SPB4YFL002C MRPL35Q06678 367 aa3.78□□□□□ -1.8
SPB4YFL002C LDS2Q08218 356 aa3.78□□□□□ -1.8
SPB4YFL002C OSW1Q08692 278 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms